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Sample GSM317651 Query DataSets for GSM317651
Status Public on Sep 04, 2008
Title depression, BA10-3
Sample type RNA
 
Source name depression
Organism Homo sapiens
Characteristics prefrontal cortex (BA10)
depression
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol Biotin-labeled cRNA sample was hybridized according to manufacture's instruction.
Scan protocol Hybridization signal on the chip was scanned using an HP GeneArray scanner (Hewlett-Packard).
Description Gene expression data in human prefromtal cortex
Data processing The data were normalized by median centering by GeneSpring software (Agilent).
 
Submission date Sep 03, 2008
Last update date Mar 16, 2009
Contact name Kazuya Iwamoto
E-mail(s) kaziwamoto@brain.riken.jp
Phone +81-48-467-6949
Fax +81-48-467-6947
URL http://www.brain.riken.go.jp/labs/mdmd/indexe.htm
Organization name RIKEN
Department Brain Science Institute
Lab Lab for Molecular Dynamics of Mental Disorders
Street address 2-1 Hirosawa
City Wako
ZIP/Postal code 351-0198
Country Japan
 
Platform ID GPL8300
Series (1)
GSE12654 Gene expression from human prefrontal cortex (BA10)

Data table header descriptions
ID_REF
VALUE The value was obtained by median centering.

Data table
ID_REF VALUE
100_g_at 5.516666889
1000_at 16.51111221
1001_at 0.877777815
1002_f_at 0.144444436
1003_s_at 0.26111111
1004_at 0.522222221
1005_at 3.150000095
1006_at 0.06666667
1007_s_at 11.16666698
1008_f_at 2.544444323
1009_at 52.36111069
101_at 1.905555487
1010_at 0.344444424
1011_s_at 6.122221947
1012_at 0.216666669
1013_at 0.266666681
1014_at 4.711111546
1015_s_at 1.494444489
1016_s_at 0.13333334
1017_at 0.972222209

Total number of rows: 12625

Table truncated, full table size 258 Kbytes.




Supplementary file Size Download File type/resource
GSM317651.CEL.gz 2.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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