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Sample GSM317650 Query DataSets for GSM317650
Status Public on Sep 04, 2008
Title depression, BA10-2
Sample type RNA
 
Source name depression
Organism Homo sapiens
Characteristics prefrontal cortex (BA10)
depression
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol Biotin-labeled cRNA sample was hybridized according to manufacture's instruction.
Scan protocol Hybridization signal on the chip was scanned using an HP GeneArray scanner (Hewlett-Packard).
Description Gene expression data in human prefromtal cortex
Data processing The data were normalized by median centering by GeneSpring software (Agilent).
 
Submission date Sep 03, 2008
Last update date Mar 16, 2009
Contact name Kazuya Iwamoto
E-mail(s) kaziwamoto@brain.riken.jp
Phone +81-48-467-6949
Fax +81-48-467-6947
URL http://www.brain.riken.go.jp/labs/mdmd/indexe.htm
Organization name RIKEN
Department Brain Science Institute
Lab Lab for Molecular Dynamics of Mental Disorders
Street address 2-1 Hirosawa
City Wako
ZIP/Postal code 351-0198
Country Japan
 
Platform ID GPL8300
Series (1)
GSE12654 Gene expression from human prefrontal cortex (BA10)

Data table header descriptions
ID_REF
VALUE The value was obtained by median centering.

Data table
ID_REF VALUE
100_g_at 2.887096882
1000_at 11.93548489
1001_at 1.500000119
1002_f_at 0.22580646
1003_s_at 0.145161301
1004_at 0.709677458
1005_at 0.774193645
1006_at 0.161290333
1007_s_at 24.22580719
1008_f_at 1.016129136
1009_at 30.90322876
101_at 1.032258153
1010_at 1.064516187
1011_s_at 3.564516306
1012_at 0.080645166
1013_at 0.193548411
1014_at 3.935484171
1015_s_at 0.967741966
1016_s_at 0.54838717
1017_at 0.161290333

Total number of rows: 12625

Table truncated, full table size 258 Kbytes.




Supplementary file Size Download File type/resource
GSM317650.CEL.gz 2.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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