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Sample GSM31101 Query DataSets for GSM31101
Status Public on Oct 28, 2004
Title CBCD34_setE_4hr
Sample type RNA
 
Source name umbilical cord blood CD34+ cells, 4 hrs TGF-beta treatment
Organism Homo sapiens
Extracted molecule total RNA
 
Description Total RNA
RNeasy extraction
Two rounds amplification (RT+IVT) Ambion MessageAmp kit
 
Submission date Sep 28, 2004
Last update date May 27, 2005
Contact name Agnes Viale
E-mail(s) vialea@mskcc.org
Phone 212 639 3031
Fax 212 717 3053
Organization name Memorial Sloan Kettering Cancer Center
Department Molecular Biology
Lab Genomics Core Laboratory
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL96
Series (1)
GSE1802 CBCD34-TGFbeta targets

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE confidence on call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 204.6 P 0.000297
AFFX-BioB-M_at 350.2 P 0.00006
AFFX-BioB-3_at 252.2 P 0.000052
AFFX-BioC-5_at 572.6 P 0.00006
AFFX-BioC-3_at 482.4 P 0.000052
AFFX-BioDn-5_at 568.9 P 0.000052
AFFX-BioDn-3_at 2523.4 P 0.000044
AFFX-CreX-5_at 5919.3 P 0.000044
AFFX-CreX-3_at 8365.5 P 0.000044
AFFX-DapX-5_at 1.1 A 0.559354
AFFX-DapX-M_at 4.5 A 0.559354
AFFX-DapX-3_at 0.9 A 0.852061
AFFX-LysX-5_at 2.6 A 0.574038
AFFX-LysX-M_at 2.4 A 0.749204
AFFX-LysX-3_at 0.9 A 0.868639
AFFX-PheX-5_at 0.7 A 0.993813
AFFX-PheX-M_at 1.1 A 0.910522
AFFX-PheX-3_at 31.2 P 0.039661
AFFX-ThrX-5_at 8.7 A 0.51489
AFFX-ThrX-M_at 2.7 A 0.699394

Total number of rows: 22283

Table truncated, full table size 580 Kbytes.




Supplementary data files not provided

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