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GEO accession:
Sample GSM310591
Query DataSets for GSM310591
Status
Public on Aug 22, 2011
Title
CNS PNET44 Xba1
Sample type
genomic
Source name
Brain Tumour, CNS PNET44 Xba1
Organism
Homo sapiens
Characteristics
gender: male
tumour location: Parietal Lobe
Extracted molecule
genomic DNA
Extraction protocol
Phenol/Chloroform Isoamyl Alcohol and PLG tubes
Label
Biotin
Label protocol
Affymetrix 100K Labeling Protocol
Hybridization protocol
Affymetrix 100K Hybridisation Protocol
Scan protocol
Affymetrix 100K Scanning Protocol
Description
CNS PNET44 Xba1
Data processing
GCOS
Submission date
Aug 07, 2008
Last update date
Aug 22, 2011
Contact name
Suzanne Miller
Phone
01158230718
Fax
01158230696
URL
http://www.cbtrc.org
Organization name
Children's Brain Tumour Research Centre
Department
Human Development
Lab
D18
Street address
Queen's Medical Centre
City
Nottingham
State/province
Nottinghamshire
ZIP/Postal code
NG72UH
Country
United Kingdom
Platform ID
GPL2005
Series (1)
GSE12370
Genome-wide molecular characterisation of CNS PNET and Pineoblastoma
Data table header descriptions
ID_REF
VALUE
Genotypes: AA, AB, BB, No Call
CONFIDENCE
RAS1
Relative allele signal for the data in the first probe group
RAS2
Relative allele signal for the data in the second probe group
P-VALUE AA
P-VALUE AB
P-VALUE BB
P-VALUE NO CALL
Data table
ID_REF
VALUE
CONFIDENCE
RAS1
RAS2
P-VALUE AA
P-VALUE AB
P-VALUE BB
P-VALUE NO CALL
AFFX-5Q-123
No Call
0
0
0
0
0
0
0
AFFX-5Q-456
No Call
0
0
0
0
0
0
0
AFFX-5Q-789
No Call
0
0
0
0
0
0
0
AFFX-5Q-ABC
No Call
0
0
0
0
0
0
0
AFFX-barcodeA
No Call
0
0
0
0
0
0
0
AFFX-barcodeB
No Call
0
0
0
0
0
0
0
AFFX-barcodeC
No Call
0
0
0
0
0
0
0
AFFX-barcodeD
No Call
0
0
0
0
0
0
0
AFFX-barcodeE
No Call
0
0
0
0
0
0
0
AFFX-barcodeF
No Call
0
0
0
0
0
0
0
AFFX-barcodeG
No Call
0
0
0
0
0
0
0
AFFX-barcodeH
No Call
0
0
0
0
0
0
0
AFFX-barcodeI
No Call
0
0
0
0
0
0
0
AFFX-barcodeJ
No Call
0
0
0
0
0
0
0
AFFX-barcodeK
No Call
0
0
0
0
0
0
0
AFFX-barcodeL
No Call
0
0
0
0
0
0
0
AFFX-barcodeM
No Call
0
0
0
0
0
0
0
AFFX-barcodeN
No Call
0
0
0
0
0
0
0
AFFX-barcodeO
No Call
0
0
0
0
0
0
0
AFFX-barcodeP
No Call
0
0
0
0
0
0
0
Total number of rows:
59015
Table truncated, full table size
4954 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM310591.CEL.gz
13.5 Mb
(ftp)
(http)
CEL
GSM310591.CHP.gz
107.2 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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