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Sample GSM2946756 Query DataSets for GSM2946756
Status Public on Apr 25, 2019
Title 3346_GFP control-Rep1
Sample type RNA
 
Source name iKAP primary cultured cells (#3346)
Organism Mus musculus
Characteristics expression: GFP control
Growth protocol 3346 cells were cultured in Gibco DMEM Medium with 5% Tetracycline-Free.
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Standard label protocol per the Sequencing & Non-coding RNA facility at MD Anderson Cancer Center. For more details, please contact Chang-Gong Liu <cgliu@mdanderson.org>
 
Hybridization protocol Standard hyb protocol per the Sequencing & Non-coding RNA facility at MD Anderson Cancer Center. For more details, please contact Chang-Gong Liu <cgliu@mdanderson.org>
Scan protocol Standard scan protocol per the Sequencing & Non-coding RNA facility at MD Anderson Cancer Center. For more details, please contact Chang-Gong Liu <cgliu@mdanderson.org>
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Jan 24, 2018
Last update date Apr 25, 2019
Contact name Guocan Wang
Organization name MD Anderson Cancer Center
Street address 1515 Holcombe Blvd, T7.3900
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL1261
Series (1)
GSE109579 Microarray of IRF2 overexpress in iKAP primary cultured cells (#3346)

Data table header descriptions
ID_REF
VALUE MAS5

Data table
ID_REF VALUE
1415670_at 537.2446292
1415671_at 556.9511115
1415672_at 1651.34506
1415673_at 261.4117333
1415674_a_at 627.3474529
1415675_at 491.5031002
1415676_a_at 1982.400111
1415677_at 367.7235715
1415678_at 815.3645298
1415679_at 946.239543
1415680_at 490.4670211
1415681_at 674.9996199
1415682_at 126.0404087
1415683_at 1329.687297
1415684_at 171.4616728
1415685_at 270.4413022
1415686_at 444.280957
1415687_a_at 1337.635097
1415688_at 692.1779679
1415689_s_at 143.2332234

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM2946756_10_3346-GFP-1_Mouse430_2_.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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