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Sample GSM2936322 Query DataSets for GSM2936322
Status Public on Jan 17, 2018
Title NCD 2 CLP
Sample type RNA
 
Source name bone marrow
Organism Mus musculus
Characteristics diet: normal chow
tissue: bone marrow
gender: male
cell type: BM CLP
Extracted molecule total RNA
Extraction protocol RNA extracted from cells was subjected to nCounter RNA sample preparation according to the manufacturer’s instructions.
Label labeled by manufacturer
Label protocol Labeled probes are provided by the manufacturer.
 
Hybridization protocol 100 ng of extracted RNA was used for hybridization to the probes at 65°C for 18 hours, following the manufacturer’s protocol.
Scan protocol Hybridized probes were counted on nCounter Prep Station and Digital Analyzer
Data processing The nCounter results were analyzed statistically using manufacturer's software nSolver 2.5.
 
Submission date Jan 16, 2018
Last update date Jan 24, 2018
Contact name Lisa Ann Borghesi
E-mail(s) borghesi@pitt.edu
Phone 412-383-9737
Organization name University of Pittsburgh
Department Immunology
Street address 200 Lothrop ST
City Pittsburgh
State/province PA
ZIP/Postal code 15261
Country USA
 
Platform ID GPL24518
Series (1)
GSE109269 Bone marrow lympho-myeloid malfunction in obesity requires precursor cell-autonomous TLR4

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
APC 576.63
Ahr 32.2
Akt1 1228.99
Akt2 220.04
Bad 302.92
Bax 151.46
Bcl11a 992.25
Bcl11b 1.79
Bcl2 267.15
Bmi1 183.07
Brd3 596.9
CD34 2261.19
CD41 36.37
CD48 2551.59
CD52 2717.37
CD53 155.64
CD55 33.39
Casp8 1054.87
Casp9 69.77
Cbx2 273.11

Total number of rows: 164

Table truncated, full table size 1 Kbytes.




Supplementary file Size Download File type/resource
GSM2936322_CLP_NCD_2_20160209_20160209diet20wks_01_02.RCC.gz 2.2 Kb (ftp)(http) RCC
Processed data included within Sample table
Processed data are available on Series record

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