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Sample GSM2936321 Query DataSets for GSM2936321
Status Public on Jan 17, 2018
Title NCD 1 CLP
Sample type RNA
 
Source name bone marrow
Organism Mus musculus
Characteristics diet: normal chow
tissue: bone marrow
gender: male
cell type: BM CLP
Extracted molecule total RNA
Extraction protocol RNA extracted from cells was subjected to nCounter RNA sample preparation according to the manufacturer’s instructions.
Label labeled by manufacturer
Label protocol Labeled probes are provided by the manufacturer.
 
Hybridization protocol 100 ng of extracted RNA was used for hybridization to the probes at 65°C for 18 hours, following the manufacturer’s protocol.
Scan protocol Hybridized probes were counted on nCounter Prep Station and Digital Analyzer
Data processing The nCounter results were analyzed statistically using manufacturer's software nSolver 2.5.
 
Submission date Jan 16, 2018
Last update date Jan 24, 2018
Contact name Lisa Ann Borghesi
E-mail(s) borghesi@pitt.edu
Phone 412-383-9737
Organization name University of Pittsburgh
Department Immunology
Street address 200 Lothrop ST
City Pittsburgh
State/province PA
ZIP/Postal code 15261
Country USA
 
Platform ID GPL24518
Series (1)
GSE109269 Bone marrow lympho-myeloid malfunction in obesity requires precursor cell-autonomous TLR4

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
APC 877.14
Ahr 27.28
Akt1 1632.26
Akt2 267.02
Bad 291.42
Bax 176.58
Bcl11a 1404.01
Bcl11b 18.66
Bcl2 193.8
Bmi1 246.92
Brd3 818.29
CD34 1004.91
CD41 27.28
CD48 2147.64
CD52 1949.53
CD53 234
CD55 74.65
Casp8 1201.59
Casp9 96.18
Cbx2 478.05

Total number of rows: 164

Table truncated, full table size 1 Kbytes.




Supplementary file Size Download File type/resource
GSM2936321_CLP_NCD_1_20160209_20160209diet20wks_01_01.RCC.gz 2.2 Kb (ftp)(http) RCC
Processed data included within Sample table
Processed data are available on Series record

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