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Sample GSM28998 Query DataSets for GSM28998
Status Public on Dec 01, 2005
Title Hs 683 glioma cell lines 12hrs-1 time point
Sample type RNA
 
Source name Human Brain (Hs 683) glioma cell lines treated with 300nM of candoxin and incubated for 12 hrs
Organism Homo sapiens
Extracted molecule total RNA
 
Description Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-1
 
Submission date Aug 14, 2004
Last update date Oct 28, 2005
Contact name Pachiappan Arjunan
Organization name NUS, NIH, GRU
Department Anatomy, Unit on Retinal Vascular Neurobiology, BMB
Lab VTRP, URVN, BMB
Street address 1120 15th ST, Laney walker Blvd,
City Augusta
State/province Georgia
ZIP/Postal code 30904
Country USA
 
Platform ID GPL96
Series (1)
GSE1682 Global gene expression analysis of human glioma (Hs 683) cell lines exposed to candoxin

Data table header descriptions
ID_REF
VALUE raw signal intensity
ABS_CALL present, absent, marginal
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-TrpnX-M_at 10.4 A 0.860518
AFFX-TrpnX-5_at 25.9 A 0.41138
AFFX-TrpnX-3_at 6 A 0.645547
AFFX-ThrX-M_at 9.1 A 0.749204
AFFX-ThrX-5_at 10.4 A 0.883887
AFFX-ThrX-3_at 9.8 A 0.891021
AFFX-r2-P1-cre-5_at 8718.2 P 0.000244
AFFX-r2-P1-cre-3_at 8937.4 P 0.000244
AFFX-r2-Hs28SrRNA-M_at 139.6 A 0.149658
AFFX-r2-Hs28SrRNA-5_at 25.2 A 0.533936
AFFX-r2-Hs28SrRNA-3_at 22.5 A 0.696289
AFFX-r2-Hs18SrRNA-M_x_at 66.3 A 0.466064
AFFX-r2-Hs18SrRNA-5_at 15.1 A 0.80542
AFFX-r2-Hs18SrRNA-3_s_at 114.8 A 0.533936
AFFX-r2-Ec-bioD-5_at 1653 P 0.000244
AFFX-r2-Ec-bioD-3_at 1935.3 P 0.000244
AFFX-r2-Ec-bioC-5_at 439.8 P 0.001953
AFFX-r2-Ec-bioC-3_at 566.1 P 0.000244
AFFX-r2-Ec-bioB-M_at 163.7 P 0.000244
AFFX-r2-Ec-bioB-5_at 165.4 P 0.005859

Total number of rows: 22283

Table truncated, full table size 594 Kbytes.




Supplementary data files not provided

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