|
Status |
Public on Jan 08, 2018 |
Title |
Dsim_CidM_15m_IP_(20151207_PT_Ds_ML82_IP_15min) |
Sample type |
SRA |
|
|
Source name |
ML82-19a cells;anti-CidM
|
Organism |
Drosophila simulans |
Characteristics |
cell type: ML82-19a cells antibody: anti-CidM
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Drosophila ChIP_protocol.rtf PMID 25827087
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina HiSeq 2500 |
|
|
Description |
ChIP Drosophila simulans CENP-A IP 15 min
|
Data processing |
We looked for short specific alpha satellite sequences in the fastq files using grep.
|
|
|
Submission date |
Oct 17, 2017 |
Last update date |
May 15, 2019 |
Contact name |
Jorja Henikoff |
E-mail(s) |
jorja@fhcrc.org
|
Phone |
206-667-4850
|
Organization name |
Fred Hutchinson Cancer Research Center
|
Department |
Basic Sciences
|
Lab |
Henikoff
|
Street address |
1100 Fairview AV N, A1-162
|
City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98109-1024 |
Country |
USA |
|
|
Platform ID |
GPL22293 |
Series (1) |
GSE105100 |
Simple and Complex Centromeric Satellites in Drosophila Sibling Species |
|
Relations |
BioSample |
SAMN07796391 |
SRA |
SRX3293417 |