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GEO accession:
Sample GSM280367
Query DataSets for GSM280367
Status
Public on Apr 03, 2009
Title
Post Ctrl 4
Sample type
RNA
Source name
Post Vaccination Control Non Vaccinated tumor
Organism
Homo sapiens
Characteristics
Post Vaccination Control Non Vaccinated tumor
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the Qiagen kit instructions.
Label
biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
RNA from frozen Glioblastoma Multiforme tumor
Data processing
MAS5 Normalized
Submission date
Apr 08, 2008
Last update date
Aug 28, 2018
Contact name
Gretchen Duvall
Organization name
Cedars Sinai Medical Center
Street address
8700 Beverly BLVD
City
Los Angeles
State/province
CA
ZIP/Postal code
90048
Country
USA
Platform ID
GPL570
Series (1)
GSE11100
Dendritic Cell Vaccine against Glioblastoma Multiforme Patients
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
MAS5 calculated Signal intensity
ABS_CALL
The call in an absolute analysis that indicates if the transcript was Present P- Absent A- Marginal M- or No Call NC
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
2419.9
P
0.020022
AFFX-BioB-M_at
2875.3
P
0.009337
AFFX-BioB-3_at
1113.9
A
0.205732
AFFX-BioC-5_at
5711.4
P
0.000662
AFFX-BioC-3_at
4505.4
P
0.00006
AFFX-BioDn-5_at
10296.1
P
0.000052
AFFX-BioDn-3_at
34897.1
P
0.000297
AFFX-CreX-5_at
78093
P
0.000052
AFFX-CreX-3_at
88929
P
0.000044
AFFX-DapX-5_at
701.9
P
0.030976
AFFX-DapX-M_at
485.6
A
0.51489
AFFX-DapX-3_at
93.2
A
0.945787
AFFX-LysX-5_at
73.4
A
0.921998
AFFX-LysX-M_at
559.2
A
0.48511
AFFX-LysX-3_at
123.8
A
0.440646
AFFX-PheX-5_at
97.5
A
0.794268
AFFX-PheX-M_at
138.1
A
0.843268
AFFX-PheX-3_at
238.2
A
0.860518
AFFX-ThrX-5_at
171.3
A
0.868639
AFFX-ThrX-M_at
216.9
A
0.712257
Total number of rows:
54675
Table truncated, full table size
1493 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM280367.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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