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Sample GSM26523 Query DataSets for GSM26523
Status Public on Oct 01, 2004
Title GEIM179-U133A-DM
Sample type RNA
 
Source name muscle
Organism Homo sapiens
Extracted molecule total RNA
 
Description Muscle biopsy specimen from a patient with dermatomyositis (DM)
Keywords = Inflammatory myopathy, Dermatomyositis, Inclusion body myositis, Polymyositis, MxA, plasmacytoid dendritic cells, Innate immunity, Interferon-alpha
 
Submission date Jul 05, 2004
Last update date May 27, 2005
Contact name Steven Alan Greenberg
E-mail(s) sagreenberg@partners.org
Phone 617 732-8641
Fax 617 730-2885
Organization name Brigham and Women's Hospital
Department Neurology
Lab Division of Neuromuscular Disease
Street address 75 Francis Street
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL96
Series (1)
GSE1551 dermatomyositis

Data table header descriptions
ID_REF Affymetrix U133A probeset ID
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call (Detection) in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1435 P 0.005565
AFFX-BioB-M_at 2244.5 P 0.000052
AFFX-BioB-3_at 1090 P 0.00011
AFFX-BioC-5_at 3652.4 P 0.00011
AFFX-BioC-3_at 2839.6 P 0.000127
AFFX-BioDn-5_at 2399.6 P 0.000052
AFFX-BioDn-3_at 20031 P 0.000127
AFFX-CreX-5_at 32429.2 P 0.000044
AFFX-CreX-3_at 50567.9 P 0.000044
AFFX-DapX-5_at 114.1 A 0.165861
AFFX-DapX-M_at 213.2 M 0.054213
AFFX-DapX-3_at 16.7 A 0.455413
AFFX-LysX-5_at 68.2 A 0.227636
AFFX-LysX-M_at 122.1 A 0.440646
AFFX-LysX-3_at 143.6 A 0.250796
AFFX-PheX-5_at 17.7 A 0.843268
AFFX-PheX-M_at 144.3 A 0.51489
AFFX-PheX-3_at 149.6 A 0.41138
AFFX-ThrX-5_at 35.8 A 0.772364
AFFX-ThrX-M_at 48.2 A 0.631562

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary data files not provided

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