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Sample GSM26517 Query DataSets for GSM26517
Status Public on Oct 01, 2004
Title GEIM39-U133A-DM
Sample type RNA
 
Source name muscle
Organism Homo sapiens
Extracted molecule total RNA
 
Description Muscle biopsy specimen from a patient with dermatomyositis (DM)
Keywords = Inflammatory myopathy, Dermatomyositis, Inclusion body myositis, Polymyositis, MxA, plasmacytoid dendritic cells, Innate immunity, Interferon-alpha
 
Submission date Jul 05, 2004
Last update date May 27, 2005
Contact name Steven Alan Greenberg
E-mail(s) sagreenberg@partners.org
Phone 617 732-8641
Fax 617 730-2885
Organization name Brigham and Women's Hospital
Department Neurology
Lab Division of Neuromuscular Disease
Street address 75 Francis Street
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL96
Series (1)
GSE1551 dermatomyositis

Data table header descriptions
ID_REF Affymetrix U133A probeset ID
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call (Detection) in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 597.9 P 0.021902
AFFX-BioB-M_at 1473 P 0.001593
AFFX-BioB-3_at 610.1 P 0.00141
AFFX-BioC-5_at 2397.5 P 0.000127
AFFX-BioC-3_at 1812.5 P 0.000169
AFFX-BioDn-5_at 1996.3 P 0.00006
AFFX-BioDn-3_at 15085.2 P 0.000258
AFFX-CreX-5_at 21675.4 P 0.000044
AFFX-CreX-3_at 31656.5 P 0.000044
AFFX-DapX-5_at 139.5 M 0.058444
AFFX-DapX-M_at 188 A 0.0727
AFFX-DapX-3_at 14.9 A 0.843268
AFFX-LysX-5_at 36.6 A 0.39692
AFFX-LysX-M_at 181.2 A 0.5
AFFX-LysX-3_at 114.2 A 0.205732
AFFX-PheX-5_at 14.6 A 0.60308
AFFX-PheX-M_at 30.9 A 0.749204
AFFX-PheX-3_at 158.1 A 0.300606
AFFX-ThrX-5_at 63.9 A 0.672921
AFFX-ThrX-M_at 72.3 A 0.440646

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary data files not provided

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