GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM25852
Query DataSets for GSM25852
Status
Public on Dec 03, 2004
Title
PGA-Hs_V-5
Sample type
RNA
Source name
left ventricle biopsy
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Human subjects with viral cardiomyopathy
Keywords = viral cardiomyopathy
Submission date
Jun 18, 2004
Last update date
Aug 28, 2018
Contact name
Martina Schinke
URL
http://www.cardiogenomics.org
Organization name
Harvard University
Department
Bauer Center for Genomic Research
Lab
Cardiogenomics
Street address
7 Divinity Ave
City
Cambridge
State/province
MA
ZIP/Postal code
02138
Country
USA
Platform ID
GPL570
Series (1)
GSE1145
changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
597.2
P
0.00141
AFFX-BioB-M_at
715.8
P
0.000857
AFFX-BioB-3_at
509.8
P
0.00762
AFFX-BioC-5_at
1163.7
P
0.000225
AFFX-BioC-3_at
1046.9
P
0.00039
AFFX-BioDn-5_at
1449.2
P
0.00011
AFFX-BioDn-3_at
8488.4
P
0.000446
AFFX-CreX-5_at
16241.4
P
0.000052
AFFX-CreX-3_at
15818
P
0.000052
AFFX-DapX-5_at
97.7
A
0.0727
AFFX-DapX-M_at
15.9
A
0.41138
AFFX-DapX-3_at
62.8
A
0.51489
AFFX-LysX-5_at
53.3
A
0.227636
AFFX-LysX-M_at
51.3
A
0.5
AFFX-LysX-3_at
3.2
A
0.699394
AFFX-PheX-5_at
5.5
A
0.834139
AFFX-PheX-M_at
13.2
A
0.868639
AFFX-PheX-3_at
17.3
A
0.868639
AFFX-ThrX-5_at
91.8
A
0.382599
AFFX-ThrX-M_at
37.5
A
0.574038
Total number of rows:
54675
Table truncated, full table size
1451 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM25852_PAV_5.cel.gz
5.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
