GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM25829
Query DataSets for GSM25829
Status
Public on Dec 03, 2004
Title
PGA-Hs_S-2
Sample type
RNA
Source name
left ventricle biopsy
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Human subjects with ischemic cardiomyopathy
Keywords = ischemic cardiomyopathy
Submission date
Jun 18, 2004
Last update date
Aug 28, 2018
Contact name
Martina Schinke
URL
http://www.cardiogenomics.org
Organization name
Harvard University
Department
Bauer Center for Genomic Research
Lab
Cardiogenomics
Street address
7 Divinity Ave
City
Cambridge
State/province
MA
ZIP/Postal code
02138
Country
USA
Platform ID
GPL570
Series (1)
GSE1145
changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
402
P
0.030976
AFFX-BioB-M_at
296.3
P
0.00141
AFFX-BioB-3_at
188.7
P
0.006871
AFFX-BioC-5_at
646.4
P
0.000195
AFFX-BioC-3_at
533.6
P
0.000972
AFFX-BioDn-5_at
560
P
0.000509
AFFX-BioDn-3_at
3712.6
P
0.000127
AFFX-CreX-5_at
8586.6
P
0.00007
AFFX-CreX-3_at
9368.2
P
0.00006
AFFX-DapX-5_at
28.1
A
0.216524
AFFX-DapX-M_at
27.9
A
0.382599
AFFX-DapX-3_at
5.9
A
0.897835
AFFX-LysX-5_at
29.8
A
0.470241
AFFX-LysX-M_at
49.2
A
0.300606
AFFX-LysX-3_at
22.5
A
0.354453
AFFX-PheX-5_at
5.2
A
0.760937
AFFX-PheX-M_at
4.6
A
0.953518
AFFX-PheX-3_at
20.2
A
0.737173
AFFX-ThrX-5_at
86.5
A
0.165861
AFFX-ThrX-M_at
50
A
0.382599
Total number of rows:
54675
Table truncated, full table size
1447 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM25829_PAS_2.cel.gz
5.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
