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Sample GSM2476240 Query DataSets for GSM2476240
Status Public on Jul 13, 2017
Title Cnd3.Active_Interphase_3
Sample type SRA
 
Source name interphase
Organism Schizosaccharomyces pombe
Characteristics strain: YUK585
cell cycle stage: interphase
sample group: 2
Treatment protocol Mitotic arrested cells were crosslinked with 0.5 % formaldehyde for 30 minutes at 25 ºC
Growth protocol Cells were grown in EMM supplemented with glutamate. Culture was separated into interphase sample and mitotic samples. Cells were arrested in mitosis by addition of 5 µg/mL of thiamine with 0.5 mM of NAA, 5 µM of 1NM-PP1, or DMSO.
Extracted molecule genomic DNA
Extraction protocol Crosslinked chromatin was digested by DpnII. The sticky ends were filled in by Biotin-14-dATP and the other dNTPs. Proximal ligation was performed in diluted conditions, followed by DNA recovery.
Crosslinked chromatin was immunoprecipitated with anti-HA antibody.
NEBNext Ultra DNA Library Prep kit for Illumina and NEBNext Multiplex Oligos for Illumina (Index Primers Set 1) were used for adapter ligation and indexing. Indexed Hi-C library was purified by double selection of SPRI selection beads.
 
Library strategy OTHER
Library source genomic
Library selection other
Instrument model Illumina HiSeq 2000
 
Description Hi-C
Data processing Read Trimming. When present, reads were trimmed to until immediately after the first occurrence of a DpnII site (GATC). Read pairs where either read was shorter than 20bp were discarded.
Alignment. Each read in the pair was independently aligned to build ASM294v2.21 of the Pombe genome using the BWA-mem algorithm (version 0.7.12).
1st Pair Filter. Read pairs were either read was unmapped or had a mapping quality of <10 were discarded.
2nd Pair Filter. Reads pairs that were mapped concordantly, within a 2kb region of the genome, were discarded.
3rd Pair Filter. Duplicate read pairs were discarded. Duplicate read pairs are defined as reads where the mapped read start site, read end site and read strand are identical for each read in the pair.
4th Pair Filter. Read pairs were either read start site was >1kb of the downstream DpnII restriction site were discarded.
Identification of frag-end ligations. Ligation events are defined as occurring between the centre of the downstream DpnII sites of the remaining mapped pairs.
Generation of count matrix. Chromosomes I, II and III were split into equally sized bins of the desired size. Where the chromosome length was not a multiple of the bin size, bases at either end of the chromosome were ignored. A zero-matrix was then generated where each row and column is assigned to an individual bin. Each cell in the matrix therefore represents a ligation event occurring between DpnII sites contained within the column and row bins. The matrix is then completed by adding 1 to the value of each cell covering the observed frag-end ligations.
Normalisation of the count matrices. Count matrices, covering the regions of interest, are extracted. Within bin ligations (self-ligations) are removed by setting the diagonal values to zero. Bins containing a low number of interactions are also set to zero. Where matrices are to be compared, any bins with a low count in any individual matrix is removed from all matrices within the sample sample group. The modified count matrix is then normalised using the iterative correction algorythm described by Imakaev et al, Nature Methods, 2012, 9(10):999-1003.
Genome_build: ASM294v2.21
Supplementary_files_format_and_content: Processed files are gzipped compressed text files containing the normalised count matrices for all samples at X different bin sizes.
Supplementary_files_format_and_content: ----------------------------
Supplementary_files_format_and_content: NGS-8177.2000.Genome.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8177.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8177.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8177.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8177.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8177.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8177.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8177, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8177.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8177, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8177.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8177, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8177.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8177, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8177.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8177, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8177.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8177, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8177.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8177, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8178.2000.Genome.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8178.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8178.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8178.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8178.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8178.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8178.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8178, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8178.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8178, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8178.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8178, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8178.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8178, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8178.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8178, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8178.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8178, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8178.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8178, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8179.2000.Genome.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8179.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8179.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8179.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8179.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8179.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8179.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8179, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8179.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8179, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8179.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8179, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8179.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8179, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8179.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8179, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8179.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8179, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8179.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8179, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8309.2000.Genome.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8309.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8309.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8309.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8309.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8309.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8309.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8309, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8309.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8309, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8309.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8309, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8309.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8309, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8309.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8309, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8309.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8309, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8309.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8309, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8310.2000.Genome.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8310.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8310.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8310.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8310.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8310.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8310.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8310, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8310.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8310, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8310.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8310, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8310.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8310, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8310.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8310, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8310.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8310, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8310.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8310, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8311.2000.Genome.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8311.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8311.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8311.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8311.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8311.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8311.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8311, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8311.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8311, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8311.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8311, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8311.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8311, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8311.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8311, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8311.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8311, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8311.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8311, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8464.2000.Genome.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8464.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8464.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8464.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8464.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8464.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8464.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8464, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8464.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8464, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8464.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8464, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8464.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8464, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8464.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8464, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8464.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8464, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8464.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8464, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8465.2000.Genome.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8465.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8465.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8465.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8465.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8465.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8465.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8465, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8465.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8465, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8465.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8465, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8465.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8465, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8465.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8465, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8465.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8465, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8465.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8465, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8466.2000.Genome.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8466.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8466.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8466.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8466.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8466.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8466.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8466, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8466.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8466, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8466.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8466, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8466.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8466, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8466.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8466, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8466.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8466, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8466.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8466, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8467.2000.Genome.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8467.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8467.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8467.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8467.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8467.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8467.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8467, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8467.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8467, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8467.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8467, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8467.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8467, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8467.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8467, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8467.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8467, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8467.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8467, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8468.2000.Genome.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8468.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8468.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8468.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8468.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8468.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8468.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8468, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8468.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8468, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8468.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8468, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8468.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8468, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8468.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8468, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8468.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8468, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8468.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8468, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8469.2000.Genome.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8469.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8469.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8469.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8469.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8469.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8469.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8469, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8469.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8469, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8469.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8469, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8469.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8469, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8469.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8469, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8469.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8469, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8469.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8469, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8593.2000.Genome.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8593.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8593.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8593.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8593.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8593.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8593.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8593, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8593.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8593, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8593.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8593, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8593.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8593, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8593.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8593, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8593.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8593, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8593.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8593, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8594.2000.Genome.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8594.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8594.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8594.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8594.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8594.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8594.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8594, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8594.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8594, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8594.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8594, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8594.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8594, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8594.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8594, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8594.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8594, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8594.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8594, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8595.2000.Genome.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8595.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8595.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8595.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8595.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8595.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8595.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8595, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8595.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8595, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8595.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8595, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8595.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8595, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8595.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8595, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8595.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8595, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8595.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8595, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8596.2000.Genome.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8596.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8596.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8596.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8596.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8596.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8596.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8596, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8596.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8596, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8596.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8596, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8596.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8596, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8596.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8596, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8596.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8596, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8596.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8596, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8597.2000.Genome.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8597.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8597.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8597.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8597.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8597.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8597.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8597, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8597.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8597, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8597.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8597, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8597.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8597, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8597.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8597, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8597.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8597, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8597.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8597, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8598.2000.Genome.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-8598.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8598.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-8598.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8598.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-8598.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8598.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-8598, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-8598.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-8598, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8598.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-8598, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-8598.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-8598, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8598.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-8598, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-8598.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-8598, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-8598.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-8598, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9243.2000.Genome.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9243.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9243.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9243.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9243.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9243.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9243.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9243, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9243.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9243, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9243.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9243, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9243.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9243, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9243.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9243, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9243.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9243, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9243.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9243, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9244.2000.Genome.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9244.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9244.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9244.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9244.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9244.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9244.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9244, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9244.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9244, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9244.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9244, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9244.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9244, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9244.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9244, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9244.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9244, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9244.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9244, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9245.2000.Genome.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9245.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9245.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9245.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9245.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9245.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9245.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9245, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9245.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9245, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9245.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9245, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9245.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9245, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9245.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9245, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9245.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9245, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9245.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9245, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9580.2000.Genome.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9580.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9580.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9580.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9580.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9580.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9580.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9580, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9580.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9580, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9580.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9580, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9580.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9580, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9580.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9580, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9580.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9580, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9580.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9580, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9581.2000.Genome.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9581.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9581.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9581.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9581.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9581.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9581.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9581, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9581.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9581, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9581.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9581, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9581.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9581, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9581.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9581, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9581.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9581, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9581.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9581, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9582.2000.Genome.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9582.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9582.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9582.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9582.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9582.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9582.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9582, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9582.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9582, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9582.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9582, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9582.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9582, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9582.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9582, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9582.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9582, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9582.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9582, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9583.2000.Genome.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9583.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9583.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9583.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9583.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9583.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9583.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9583, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9583.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9583, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9583.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9583, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9583.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9583, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9583.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9583, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9583.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9583, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9583.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9583, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9584.2000.Genome.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9584.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9584.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9584.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9584.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9584.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9584.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9584, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9584.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9584, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9584.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9584, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9584.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9584, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9584.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9584, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9584.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9584, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9584.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9584, bin size 5000, region Right arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9585.2000.Genome.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Chromosome I, II & III, minimum count 500
Supplementary_files_format_and_content: NGS-9585.2000.I_ArmL.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Left arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9585.2000.I_ArmR.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Right arm chromosome I, minimum count 500
Supplementary_files_format_and_content: NGS-9585.2000.II_ArmL.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Left arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9585.2000.II_ArmR.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Right arm chromosome II, minimum count 500
Supplementary_files_format_and_content: NGS-9585.2000.III_ArmL.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Left arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9585.2000.III_ArmR.500.noself.normMatrix.gz: sample NGS-9585, bin size 2000, region Right arm chromosome III, minimum count 500
Supplementary_files_format_and_content: NGS-9585.5000.I_ArmL.1000.noself.normMatrix.gz: sample NGS-9585, bin size 5000, region Left arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9585.5000.I_ArmR.1000.noself.normMatrix.gz: sample NGS-9585, bin size 5000, region Right arm chromosome I, minimum count 1000
Supplementary_files_format_and_content: NGS-9585.5000.II_ArmL.1000.noself.normMatrix.gz: sample NGS-9585, bin size 5000, region Left arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9585.5000.II_ArmR.1000.noself.normMatrix.gz: sample NGS-9585, bin size 5000, region Right arm chromosome II, minimum count 1000
Supplementary_files_format_and_content: NGS-9585.5000.III_ArmL.1000.noself.normMatrix.gz: sample NGS-9585, bin size 5000, region Left arm chromosome III, minimum count 1000
Supplementary_files_format_and_content: NGS-9585.5000.III_ArmR.1000.noself.normMatrix.gz: sample NGS-9585, bin size 5000, region Right arm chromosome III, minimum count 1000
 
Submission date Feb 03, 2017
Last update date May 15, 2019
Contact name Yasutaka Kakui
E-mail(s) yasukakui@aoni.waseda.jp
Organization name Waseda Institute for Advanced Study
Street address 1-21-1 Nishiwaseda, Shinjuku-ku
City Tokyo
ZIP/Postal code 169-0051
Country Japan
 
Platform ID GPL13988
Series (2)
GSE94475 Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast
GSE94478 Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast
Relations
BioSample SAMN06294194
SRA SRX2536793

Supplementary file Size Download File type/resource
GSM2476240_NGS-9580.2000.Genome.500.noself.normMatrix.txt.gz 61.0 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.2000.III_ArmL.500.noself.normMatrix.txt.gz 909.8 Kb (ftp)(http) TXT
GSM2476240_NGS-9580.2000.III_ArmR.500.noself.normMatrix.txt.gz 1.4 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.2000.II_ArmL.500.noself.normMatrix.txt.gz 1.7 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.2000.II_ArmR.500.noself.normMatrix.txt.gz 4.9 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.2000.I_ArmL.500.noself.normMatrix.txt.gz 7.6 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.2000.I_ArmR.500.noself.normMatrix.txt.gz 2.1 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.5000.III_ArmL.1000.noself.normMatrix.txt.gz 172.5 Kb (ftp)(http) TXT
GSM2476240_NGS-9580.5000.III_ArmR.1000.noself.normMatrix.txt.gz 272.8 Kb (ftp)(http) TXT
GSM2476240_NGS-9580.5000.II_ArmL.1000.noself.normMatrix.txt.gz 385.3 Kb (ftp)(http) TXT
GSM2476240_NGS-9580.5000.II_ArmR.1000.noself.normMatrix.txt.gz 1.2 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.5000.I_ArmL.1000.noself.normMatrix.txt.gz 2.0 Mb (ftp)(http) TXT
GSM2476240_NGS-9580.5000.I_ArmR.1000.noself.normMatrix.txt.gz 481.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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