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Sample GSM2402510 Query DataSets for GSM2402510
Status Public on May 02, 2017
Title Embryo Sclera 11 weeks of gestation (11.1 sclera)
Sample type genomic
Source name Eye
Organism Homo sapiens
Characteristics disease state: normal
tissue: sclera
health state: Healthy donor
time: 11 weeks of gestation
Treatment protocol Untreated.
Growth protocol N/A. Primary patient samples.
Extracted molecule genomic DNA
Extraction protocol DNA extracted by Phenol:Chloroform:Isoamylalcohol (Sigma)
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Description 11.1 esclera
Data processing Genome Studio V2011.2
Submission date Nov 23, 2016
Last update date May 02, 2017
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
Platform ID GPL13534
Series (1)
GSE57362 A DNA methylation atlas of the human eye and its diseases

Data table header descriptions
VALUE Average Beta

Data table
cg00050873 0.835647579159736
cg00212031 0.0189331059341841
cg00213748 0.904708709405521
cg00214611 0.0253512359242921
cg00455876 0.683826370589311
cg01707559 0.0406911039929567
cg02004872 0.03486650236581
cg02011394 0.96753620108895
cg02050847 0.951754485052792
cg02233190 0.0197317594043552
cg02494853 0.0188248626110242
cg02839557 0.0240018933653788
cg02842889 0.0146526113511286
cg03052502 0.981939573733908
cg03155755 0.914398103621435
cg03244189 0.0253539864543833
cg03443143 0.923802827850364
cg03683899 0.00915840165675891
cg03695421 0.594813809840873
cg03706273 0.00748334540587633

Total number of rows: 485512

Table truncated, full table size 13840 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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