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Sample GSM23596

Query DataSets for GSM23596

Status

Public on Jul 15, 2004

Title

AG 10h2

Sample type

RNA

Channel 1

Source name

Inflorescences of ag-1;35S::AG-GR plants treated for 10 hours with a control solution

Organism

Arabidopsis thaliana

Extracted molecule

total RNA

Channel 2

Source name

Inflorescences of ag-1;35S::AG-GR plants treated for 10 hours with a dexamethasone-containing solution

Organism

Arabidopsis thaliana

Extracted molecule

total RNA

Description

Dye-labeled RNA samples derived from dexamethasone- or mock-treated inflorescences of ag-1;35S::AG-GR plants were co-hybridized to a cDNA array enriched for flower-specific transcripts.

Submission date

May 23, 2004

Last update date

May 27, 2005

Contact name

Frank Wellmer

E-mail(s)

wellmer@caltech.edu

Phone

626-395-8438

Organization name

California Institute of Technology

Department

Biology 156-29

Lab

Meyerowitz

Street address

1200 E. California Blvd.

City

Pasadena

State/province

ZIP/Postal code

91125

Country

USA

Platform ID

GPL1069

Series (1)

GSE1424

AGAMOUS-GR time-course experiment

Data table header descriptions
ID_REF
Intensity1	Absolute intensity measurement for the mock-treated sample after background subtraction and normalization
Intensity2	Absolute intensity measurement for the dexamethasone-treated sample after background subtraction and normalization
P-value	Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE	Log10 ratio (Intensity2 divided by Intensity1)
Flagged?	Indicates whether data from the array element were marked as failed during quality control procedures

Data table
ID_REF	Intensity1	Intensity2	P-value	VALUE	Flagged?
GP000A1	0.03472	0.03553	0.85066	0.04095	FALSE
GP000A2			1		TRUE
GP000A3	0.07393	0.09709	0.32435	0.14938	FALSE
GP000A4	0.03298	0.03306	0.88365	0.03206	FALSE
GP000B1	0.02309	0.02252	0.92156	0.02023	FALSE
GP000B2	0.0286	0.03379	0.6151	0.10333	FALSE
GP000B3	0.03959	0.03234	0.80834	-0.0569	FALSE
GP000B4	0.01228	0.0104	0.86834	-0.04095	FALSE
GP000C1	0.03287	0.03089	0.98071	0.00397	FALSE
GP000C2	0.02562	0.02612	0.84385	0.03938	FALSE
GP000C3	0.00784	0.00684	0.87596	-0.02791	FALSE
GP000C4	0.33234	0.25841	0.5702	-0.07826	FALSE
GP000D1	0.01099	0.01397	0.40145	0.13502	FALSE
GP000D2	0.02504	0.02482	0.90968	0.02706	FALSE
GP000D3	0.12222	0.0865	0.54716	-0.11913	FALSE
GP000D4	0.02677	0.0181	0.63169	-0.13887	FALSE
GP000E1	0.02159	0.02395	0.62612	0.07608	FALSE
GP000E2			1		TRUE
GP000E3	0.0124	0.01326	0.8259	0.0601	FALSE
GP000E4	0.00713	0.00827	0.81771	0.09502	FALSE

Total number of rows: 10816

Table truncated, full table size 482 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM23596.GPR.gz	782.6 Kb	(ftp)(http)	GPR