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Sample GSM23232 Query DataSets for GSM23232
Status Public on Jul 02, 2004
Title LFY2h1
Sample type RNA
 
Channel 1
Source name Callus of 35S:LFY-GR plants treated for 2 hours with a control solution
Organism Arabidopsis thaliana
Extracted molecule total RNA
 
Channel 2
Source name Callus of 35S:LFY-GR plants treated for 2 hours with a dexamethasone-containing solution
Organism Arabidopsis thaliana
Extracted molecule total RNA
 
 
Description Dye-labeled RNA samples derived from dexamethasone- or mock-treated 35S:LFY-GR root explants were co-hybridized to a cDNA array enriched for flower-specific transcripts. The data were analyzed with Rosetta Resolver as described in Wagner et al. (2004).
 
Submission date May 17, 2004
Last update date May 27, 2005
Contact name Frank Wellmer
E-mail(s) wellmer@caltech.edu
Phone 626-395-8438
Organization name California Institute of Technology
Department Biology 156-29
Lab Meyerowitz
Street address 1200 E. California Blvd.
City Pasadena
State/province CA
ZIP/Postal code 91125
Country USA
 
Platform ID GPL1069
Series (1)
GSE1411 LEAFY-GR time-course experiment in callus

Data table header descriptions
ID_REF
Intensity1 Absolute intensity measurement for the mock-treated sample after background subtraction and normalization
Intensity2 Absolute intensity measurement for the dexamethasone-treated sample after background subtraction and normalization
P-value Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE Log10 ratio (Intensity2 divided by Intensity1)
Flagged? Indicates whether data from the array element were marked as failed during quality control procedures

Data table
ID_REF Intensity1 Intensity2 P-value VALUE Flagged?
GP000A1 1.14511 1.02719 0.90472 -0.02611 FALSE
GP000A2 0.18283 0.15998 0.84796 -0.0369 FALSE
GP000A3 0.08366 0.33598 0.22016 0.62488 FALSE
GP000A4 0.01431 0.01257 0.89838 -0.03531 FALSE
GP000B1 0.0333 0.02391 0.57036 -0.12287 FALSE
GP000B2 0.01382 0.01796 0.58392 0.13484 FALSE
GP000B3 0.01985 0.02148 0.77938 0.05523 FALSE
GP000B4 0.04704 0.0324 0.21641 -0.14085 FALSE
GP000C1 0.1247 0.10726 0.65743 -0.04435 FALSE
GP000C2 0.00811 0.01018 0.72024 0.11964 FALSE
GP000C3 0.0328 0.03338 0.88157 0.0287 FALSE
GP000C4 0.2711 0.29271 0.8757 0.05438 FALSE
GP000D1 0.03481 0.05071 0.596 0.18444 FALSE
GP000D2 0.01682 0.01916 0.76619 0.07757 FALSE
GP000D3 0.11758 0.11261 0.98436 0.00231 FALSE
GP000D4 0.04601 0.05071 0.59679 0.0633 FALSE
GP000E1 0.02626 0.02095 0.79296 -0.07701 FALSE
GP000E2 0.01682 0.01796 0.75031 0.04954 FALSE
GP000E3 0.00973 0.01018 0.88772 0.04046 FALSE
GP000E4 0.01236 0.01077 0.9282 -0.03835 FALSE

Total number of rows: 10816

Table truncated, full table size 485 Kbytes.




Supplementary file Size Download File type/resource
GSM23232.gpr.gz 934.3 Kb (ftp)(http) GPR

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