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Sample GSM229806 Query DataSets for GSM229806
Status Public on Dec 25, 2007
Title 4A/WT_dup2
Sample type RNA
 
Channel 1
Source name 4A MafA
Organism Gallus gallus
Characteristics RNA from Chicken Embryo Fibroblast culture expressing the 4A MafA mutant protein
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy kit (Qiagen)
Label Cy5
Label protocol The array has been processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Detailed protocol at:
http://www.fhcrc.org/science/shared_resources/genomics/dna_array/spotted_arrays/chicken_array/Amino-allylLabelingProtocol.pdf
 
Channel 2
Source name WT MafA
Organism Gallus gallus
Characteristics RNA from Chicken Embryo Fibroblast culture expressing the WT MafA protein
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy kit (Qiagen)
Label Cy3
Label protocol The array has been processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Detailed protocol at:
http://www.fhcrc.org/science/shared_resources/genomics/dna_array/spotted_arrays/chicken_array/Amino-allylLabelingProtocol.pdf
 
 
Hybridization protocol processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Detailed protocol at:
http://www.fhcrc.org/science/shared_resources/genomics/dna_array/spotted_arrays/chicken_array/Amino-allylLabelingProtocol.pdf
Scan protocol processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Description further inquiries at the following webmail.
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Data processing processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
 
Submission date Sep 14, 2007
Last update date Aug 14, 2011
Contact name CELIO POUPONNOT
E-mail(s) celio.pouponnot@curie.u-psud.fr
Phone 33 1 69863079
Fax 33 1 69074525
URL http://www.curie.fr/equipe/85
Organization name Institut Curie
Department CNRS UMR 146
Lab EYCHENE
Street address Bat 110, Centre Universitaire
City ORSAY Cedex
ZIP/Postal code 91405
Country France
 
Platform ID GPL1836
Series (1)
GSE9045 Regulation of gene expression by MafA phosphorylation in transformed cells.

Data table header descriptions
ID_REF
VALUE RCAS-MafA4A/RCAS-MafAWT-dup2

Data table
ID_REF VALUE
C0004101_A1 null
C0004101_A10 -0.0915
C0004101_A11 null
C0004101_A12 -0.2109
C0004101_A13 -0.1718
C0004101_A14 null
C0004101_A15 null
C0004101_A16 0.0965
C0004101_A17 -0.0579
C0004101_A18 -0.0997
C0004101_A19 0.018
C0004101_A2 -0.4049
C0004101_A20 -0.2034
C0004101_A21 0.0276
C0004101_A22 0.1851
C0004101_A23 null
C0004101_A24 null
C0004101_A3 -0.2662
C0004101_A4 -0.2964
C0004101_A5 0.0187

Total number of rows: 15769

Table truncated, full table size 290 Kbytes.




Supplementary file Size Download File type/resource
GSM229806_gpr.txt.gz 1.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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