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Sample GSM229805 Query DataSets for GSM229805
Status Public on Dec 25, 2007
Title Ctl/MafAWT_dup2
Sample type RNA
 
Channel 1
Source name RCAS
Organism Gallus gallus
Characteristics RNA from Chicken Embryo Culture expressing the empty vector (RCAS)
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy kit (Qiagen)
Label Cy5
Label protocol The array has been processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Detailed protocol at:
http://www.fhcrc.org/science/shared_resources/genomics/dna_array/spotted_arrays/chicken_array/Amino-allylLabelingProtocol.pdf
 
Channel 2
Source name WT MafA
Organism Gallus gallus
Characteristics RNA from Chicken Embryo Culture expressing the WT MafA protein
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy kit (Qiagen)
Label Cy3
Label protocol The array has been processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Detailed protocol at:
http://www.fhcrc.org/science/shared_resources/genomics/dna_array/spotted_arrays/chicken_array/Amino-allylLabelingProtocol.pdf
 
 
Hybridization protocol processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Detailed protocol at:
http://www.fhcrc.org/science/shared_resources/genomics/dna_array/spotted_arrays/chicken_array/Amino-allylLabelingProtocol.pdf
Scan protocol processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Description further inquiries at the following webmail.
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
Data processing processed by:
FHRC Genomics Resource
DNA array laboratory
1100 fairview ave N, DE-740
Seattle, WA 98109
http://www.fhcrc.org/science/shared_resources/genomics/dna_array
 
Submission date Sep 14, 2007
Last update date Aug 14, 2011
Contact name CELIO POUPONNOT
E-mail(s) celio.pouponnot@curie.u-psud.fr
Phone 33 1 69863079
Fax 33 1 69074525
URL http://www.curie.fr/equipe/85
Organization name Institut Curie
Department CNRS UMR 146
Lab EYCHENE
Street address Bat 110, Centre Universitaire
City ORSAY Cedex
ZIP/Postal code 91405
Country France
 
Platform ID GPL1836
Series (1)
GSE9045 Regulation of gene expression by MafA phosphorylation in transformed cells.

Data table header descriptions
ID_REF
VALUE RCAS/RCAS-MafAWT-dup2

Data table
ID_REF VALUE
C0004101_A1 null
C0004101_A10 -0.2916
C0004101_A11 null
C0004101_A12 -0.1772
C0004101_A13 -0.048
C0004101_A14 null
C0004101_A15 null
C0004101_A16 -0.0089
C0004101_A17 -0.1307
C0004101_A18 0.1348
C0004101_A19 -0.0226
C0004101_A2 -0.9894
C0004101_A20 -0.4039
C0004101_A21 0.0779
C0004101_A22 0.1062
C0004101_A23 null
C0004101_A24 null
C0004101_A3 -0.2385
C0004101_A4 -0.4005
C0004101_A5 -0.1867

Total number of rows: 15769

Table truncated, full table size 289 Kbytes.




Supplementary file Size Download File type/resource
GSM229805_gpr.txt.gz 1.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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