|
Status |
Public on Dec 01, 2008 |
Title |
YY1 HeLa Chromatin RenLab ENCODE PCR tiling array replicate 4 ENC842_hela_yy1_122204_660_600.gpr |
Sample type |
genomic |
|
|
Channel 1 |
Source name |
Chromatin immunoprecipitated DNA from HeLa Chromatin cells using YY1 antibody
|
Organism |
Homo sapiens |
Characteristics |
Chromatin immunoprecipitated DNA from HeLa Chromatin cells using YY1 antibody
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Nimblegen
|
Label |
Cy5
|
Label protocol |
Cy3 input Cy5 ChIP sample
|
|
|
Channel 2 |
Source name |
Input DNA from HeLa Chromatin cells
|
Organism |
Homo sapiens |
Characteristics |
Input DNA from HeLa Chromatin cells
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Nimblegen
|
Label |
Cy3
|
Label protocol |
Cy3 input Cy5 ChIP sample
|
|
|
|
Hybridization protocol |
Nimblegen
|
Scan protocol |
Nimblegen
|
Description |
ChIP-chip analyses were performed for various transcription factors and chromatin modifications in various cell types. Details to be described in publications.
|
Data processing |
raw data
|
|
|
Submission date |
Aug 27, 2007 |
Last update date |
Aug 14, 2011 |
Contact name |
Bing Ren |
E-mail(s) |
biren@ucsd.edu
|
Organization name |
Ludwig Institute for Cancer Research
|
Department |
Department of Cellular and Molecular Medicine
|
Lab |
Laboratory of Gene Regulation
|
Street address |
9500 Gilman Drive
|
City |
La Jolla |
State/province |
CA |
ZIP/Postal code |
92093-0653 |
Country |
USA |
|
|
Platform ID |
GPL1454 |
Series (1) |
GSE8887 |
Ludwig Institute/UCSD ENCODE project August 2007 Release |
|