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Sample GSM2113450 Query DataSets for GSM2113450
Status Public on Apr 12, 2016
Title RPMI8226 hypoxia
Sample type RNA
 
Source name RPMI8226 hypoxia
Organism Homo sapiens
Characteristics oxygen status: hypoxia
cell line: RPMI8226
cell type: myeloma
Treatment protocol RPMI1640 plus 10% FCS.
Growth protocol normoxia: 21%O2, hypoxia: 1%O2.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol.
Label Cy3
Label protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
 
Hybridization protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Scan protocol Agilent G2600A SureScan Microarray Scanner System.
Description SAMPLE 5
Data processing GeneSpring (Agilent), computed normalized signal intensity with 75%tile normalization.
 
Submission date Apr 11, 2016
Last update date Apr 12, 2016
Contact name Sho Ikeda
E-mail(s) sikeda@med.akita-u.ac.jp
Organization name Akita univ.
Department Hematology
Lab Tagawa labo
Street address Hondo 1-1-1
City Akita
ZIP/Postal code 010-8543
Country Japan
 
Platform ID GPL17077
Series (1)
GSE80140 Gene expression of myeloma cell lines under hypoxia

Data table header descriptions
ID_REF
VALUE Log2 normalized value

Data table
ID_REF VALUE
A_23_P117082 -0.3146305
A_33_P3246448 1.5540643
A_33_P3318220 -0.092725754
A_33_P3236322 -0.22170973
A_33_P3319925 0.07579422
A_21_P0000509 1.2512889
A_21_P0000744 -0.027891159
A_24_P215804 -0.02631569
A_23_P110167 -1.0989728
A_33_P3211513 1.3959308
A_23_P103349 0.66400146
A_32_P61480 -0.004496098
A_33_P3788124 -0.004464626
A_33_P3414202 0.30249357
A_33_P3316686 -0.73890924
A_33_P3300975 -0.4330516
A_33_P3263061 -0.76940775
A_33_P3261373 -0.34111547
A_24_P278460 -2.504786
A_21_P0013109 -0.003587723

Total number of rows: 50737

Table truncated, full table size 1222 Kbytes.




Supplementary file Size Download File type/resource
GSM2113450_SG13344329_253949429818_S001_GE1_1105_Oct12_2_1.txt.gz 3.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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