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Sample GSM2113447 Query DataSets for GSM2113447
Status Public on Apr 12, 2016
Title KMS12BM normoxia
Sample type RNA
Source name KMS12BM normoxia
Organism Homo sapiens
Characteristics oxygen status: normoxia
cell line: KMS12BM
cell type: myeloma
Treatment protocol RPMI1640 plus 10% FCS.
Growth protocol normoxia: 21%O2, hypoxia: 1%O2.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol.
Label Cy3
Label protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Hybridization protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Scan protocol Agilent G2600A SureScan Microarray Scanner System.
Description SAMPLE 2
Data processing GeneSpring (Agilent), computed normalized signal intensity with 75%tile normalization.
Submission date Apr 11, 2016
Last update date Apr 12, 2016
Contact name Sho Ikeda
Organization name Akita univ.
Department Hematology
Lab Tagawa labo
Street address Hondo 1-1-1
City Akita
ZIP/Postal code 010-8543
Country Japan
Platform ID GPL17077
Series (1)
GSE80140 Gene expression of myeloma cell lines under hypoxia

Data table header descriptions
VALUE Log2 normalized value

Data table
A_23_P117082 0.44409943
A_33_P3246448 -1.0319829
A_33_P3318220 -1.1220846
A_33_P3236322 -0.4882512
A_33_P3319925 -0.7412119
A_21_P0000509 -0.5841279
A_21_P0000744 -0.10153961
A_24_P215804 -7.361623
A_23_P110167 0.43871832
A_33_P3211513 -0.34691
A_23_P103349 -1.0469017
A_32_P61480 -1.0165501
A_33_P3788124 -1.0150995
A_33_P3414202 0.32006884
A_33_P3316686 0.4631214
A_33_P3300975 4.7702208
A_33_P3263061 0.02786398
A_33_P3261373 -1.3461695
A_24_P278460 0.7542262
A_21_P0013109 -1.0069656

Total number of rows: 50737

Table truncated, full table size 1216 Kbytes.

Supplementary file Size Download File type/resource
GSM2113447_SG13344329_253949429818_S001_GE1_1105_Oct12_1_2.txt.gz 3.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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