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Sample GSM2113446 Query DataSets for GSM2113446
Status Public on Apr 12, 2016
Title RPMI8226 normoxia
Sample type RNA
Source name RPMI8226 normoxia
Organism Homo sapiens
Characteristics oxygen status: normoxia
cell line: RPMI8226
cell type: myeloma
Treatment protocol RPMI1640 plus 10% FCS.
Growth protocol normoxia: 21%O2, hypoxia: 1%O2.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol.
Label Cy3
Label protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Hybridization protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Scan protocol Agilent G2600A SureScan Microarray Scanner System.
Description SAMPLE 1
Data processing GeneSpring (Agilent), computed normalized signal intensity with 75%tile normalization.
Submission date Apr 11, 2016
Last update date Apr 12, 2016
Contact name Sho Ikeda
Organization name Akita univ.
Department Hematology
Lab Tagawa labo
Street address Hondo 1-1-1
City Akita
ZIP/Postal code 010-8543
Country Japan
Platform ID GPL17077
Series (1)
GSE80140 Gene expression of myeloma cell lines under hypoxia

Data table header descriptions
VALUE Log2 normalized value

Data table
A_23_P117082 0.049702644
A_33_P3246448 0.24783134
A_33_P3318220 -0.37118435
A_33_P3236322 0.2138362
A_33_P3319925 0.12727451
A_21_P0000509 1.9712863
A_21_P0000744 0.027891159
A_24_P215804 0.24529266
A_23_P110167 -0.62054396
A_33_P3211513 -0.13906908
A_23_P103349 0.1468792
A_32_P61480 -0.29366732
A_33_P3788124 -0.29467726
A_33_P3414202 0.38139105
A_33_P3316686 -0.4631214
A_33_P3300975 -0.12614393
A_33_P3263061 -0.21140718
A_33_P3261373 0.15686607
A_24_P278460 -0.9137397
A_21_P0013109 -0.30089092

Total number of rows: 50737

Table truncated, full table size 1224 Kbytes.

Supplementary file Size Download File type/resource
GSM2113446_SG13344329_253949429818_S001_GE1_1105_Oct12_1_1.txt.gz 3.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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