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Sample GSM2113122 Query DataSets for GSM2113122
Status Public on Dec 19, 2017
Title 19_Ctrl_P10
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P10 of life
sample origin: Ctrl diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.82135
14qI-1_st 1.05441
14qI-1_x_st 1.1852
14qI-2_st 0.730458
14qI-3_x_st 0.591686
14qI-4_st 0.706746
14qI-4_x_st 0.727045
14qI-5_st 0.619051
14qI-6_st 0.321949
14qI-7_st 1.32169
14qI-8_st 0.759056
14qI-8_x_st 0.821103
14qI-9_x_st 0.779712
14qII-10_st 0.292144
14qII-11_st 0.764
14qII-12_st 0.658782
14qII-12_x_st 0.619051
14qII-13_st 0.838559
14qII-14_st 0.541805
14qII-14_x_st 1.02746

Total number of rows: 36353

Table truncated, full table size 866 Kbytes.

Supplementary file Size Download File type/resource
GSM2113122_19_miRNA-4_0_.CEL.gz 716.2 Kb (ftp)(http) CEL
Processed data included within Sample table

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