GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM2113121 Query DataSets for GSM2113121
Status Public on Dec 19, 2017
Title 18_Ctrl_J10
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P10 of life
sample origin: Ctrl diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.891571
14qI-1_st 1.01032
14qI-1_x_st 0.830337
14qI-2_st 0.750244
14qI-3_x_st 0.71863
14qI-4_st 0.574524
14qI-4_x_st 0.682587
14qI-5_st 0.770883
14qI-6_st 0.738001
14qI-7_st 1.42102
14qI-8_st 0.640715
14qI-8_x_st 0.730986
14qI-9_x_st 0.551596
14qII-10_st 0.800201
14qII-11_st 0.557613
14qII-12_st 0.656125
14qII-12_x_st 0.745322
14qII-13_st 0.818281
14qII-14_st 0.740344
14qII-14_x_st 0.80339

Total number of rows: 36353

Table truncated, full table size 867 Kbytes.

Supplementary file Size Download File type/resource
GSM2113121_18_miRNA-4_0_.CEL.gz 718.8 Kb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap