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Sample GSM2113120 Query DataSets for GSM2113120
Status Public on Dec 19, 2017
Title 17_Ctrl_P10
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P10 of life
sample origin: Ctrl diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.438322
14qI-1_st 1.38405
14qI-1_x_st 1.38405
14qI-2_st 0.915266
14qI-3_x_st 0.750014
14qI-4_st 0.63628
14qI-4_x_st 0.359054
14qI-5_st 0.477351
14qI-6_st 0.766135
14qI-7_st 0.536809
14qI-8_st 0.614371
14qI-8_x_st 0.70835
14qI-9_x_st 0.918569
14qII-10_st 0.300824
14qII-11_st 0.367879
14qII-12_st 0.835336
14qII-12_x_st 0.652777
14qII-13_st 1.10613
14qII-14_st 0.984287
14qII-14_x_st 1.15843

Total number of rows: 36353

Table truncated, full table size 867 Kbytes.

Supplementary file Size Download File type/resource
GSM2113120_17_miRNA-4_0_.CEL.gz 718.6 Kb (ftp)(http) CEL
Processed data included within Sample table

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