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Sample GSM2113119 Query DataSets for GSM2113119
Status Public on Dec 19, 2017
Title 16_Ctrl_P10
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P10 of life
sample origin: Ctrl diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.276852
14qI-1_st 1.24175
14qI-1_x_st 1.26378
14qI-2_st 0.41981
14qI-3_x_st 0.450541
14qI-4_st 1.38085
14qI-4_x_st 1.42248
14qI-5_st 0.58142
14qI-6_st 0.42396
14qI-7_st 0.691403
14qI-8_st 0.953277
14qI-8_x_st 0.720393
14qI-9_x_st 0.571671
14qII-10_st 1.08353
14qII-11_st 0.629553
14qII-12_st 0.751722
14qII-12_x_st 0.606199
14qII-13_st 0.612811
14qII-14_st 1.37354
14qII-14_x_st 1.30514

Total number of rows: 36353

Table truncated, full table size 867 Kbytes.

Supplementary file Size Download File type/resource
GSM2113119_16_miRNA-4_0_.CEL.gz 714.6 Kb (ftp)(http) CEL
Processed data included within Sample table

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