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Sample GSM2113118 Query DataSets for GSM2113118
Status Public on Dec 19, 2017
Title 15_LPD_P10
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P10 of life
sample origin: Low protein diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 1.07443
14qI-1_st 1.09919
14qI-1_x_st 1.14927
14qI-2_st 0.686561
14qI-3_x_st 0.530046
14qI-4_st 0.953162
14qI-4_x_st 0.916736
14qI-5_st 0.697058
14qI-6_st 0.713179
14qI-7_st 1.28576
14qI-8_st 1.16247
14qI-8_x_st 0.912675
14qI-9_x_st 1.08979
14qII-10_st 0.500733
14qII-11_st 0.695115
14qII-12_st 0.742969
14qII-12_x_st 0.61579
14qII-13_st 0.854889
14qII-14_st 0.513144
14qII-14_x_st 0.72762

Total number of rows: 36353

Table truncated, full table size 868 Kbytes.

Supplementary file Size Download File type/resource
GSM2113118_15_miRNA-4_0_.CEL.gz 719.1 Kb (ftp)(http) CEL
Processed data included within Sample table

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