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Sample GSM2113117 Query DataSets for GSM2113117
Status Public on Dec 19, 2017
Title 14_LPD_P10
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P10 of life
sample origin: Low protein diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.633344
14qI-1_st 0.839693
14qI-1_x_st 0.815268
14qI-2_st 0.550997
14qI-3_x_st 0.615839
14qI-4_st 0.82628
14qI-4_x_st 0.668253
14qI-5_st 0.663689
14qI-6_st 0.579534
14qI-7_st 1.12961
14qI-8_st 0.762216
14qI-8_x_st 0.869747
14qI-9_x_st 0.96997
14qII-10_st 0.530162
14qII-11_st 1.39493
14qII-12_st 0.598628
14qII-12_x_st 0.88262
14qII-13_st 0.256482
14qII-14_st 0.700779
14qII-14_x_st 1.05272

Total number of rows: 36353

Table truncated, full table size 868 Kbytes.

Supplementary file Size Download File type/resource
GSM2113117_14_miRNA-4_0_.CEL.gz 715.1 Kb (ftp)(http) CEL
Processed data included within Sample table

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