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Sample GSM2113113 Query DataSets for GSM2113113
Status Public on Dec 19, 2017
Title 10_Ctrl_P21
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P21 of life
sample origin: Ctrl diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.753137
14qI-1_st 0.739785
14qI-1_x_st 0.783317
14qI-2_st 0.731013
14qI-3_x_st 0.708001
14qI-4_st 0.508234
14qI-4_x_st 0.508234
14qI-5_st 0.595276
14qI-6_st 0.726014
14qI-7_st 1.2304
14qI-8_st 0.39264
14qI-8_x_st 0.627967
14qI-9_x_st 0.459169
14qII-10_st 0.95877
14qII-11_st 1.04275
14qII-12_st 0.819441
14qII-12_x_st 0.684274
14qII-13_st 0.766557
14qII-14_st 0.889222
14qII-14_x_st 1.16623

Total number of rows: 36353

Table truncated, full table size 867 Kbytes.

Supplementary file Size Download File type/resource
GSM2113113_10_miRNA-4_0_.CEL.gz 713.8 Kb (ftp)(http) CEL
Processed data included within Sample table

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