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Sample GSM2113107 Query DataSets for GSM2113107
Status Public on Dec 19, 2017
Title 4_LPD_P21
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P21 of life
sample origin: Low protein diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.658472
14qI-1_st 0.529941
14qI-1_x_st 0.486022
14qI-2_st 0.73786
14qI-3_x_st 0.554551
14qI-4_st 0.700131
14qI-4_x_st 0.660816
14qI-5_st 0.333442
14qI-6_st 0.55784
14qI-7_st 0.92963
14qI-8_st 0.709911
14qI-8_x_st 0.764433
14qI-9_x_st 0.390335
14qII-10_st 0.497598
14qII-11_st 0.520501
14qII-12_st 1.02838
14qII-12_x_st 0.970514
14qII-13_st 0.667151
14qII-14_st 0.697859
14qII-14_x_st 1.04239

Total number of rows: 36353

Table truncated, full table size 867 Kbytes.

Supplementary file Size Download File type/resource
GSM2113107_4_miRNA-4_0_.CEL.gz 717.3 Kb (ftp)(http) CEL
Processed data included within Sample table

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