|
Status |
Public on Mar 08, 2016 |
Title |
SAMPLE_66_30_310127 |
Sample type |
genomic |
|
|
Source name |
Saliva
|
Organism |
Homo sapiens |
Characteristics |
gender: female collection year: 2013 disorder state: anxiety disorder psychiatric disorder status: Persistent Anxiety Disorder sample type: saliva
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA of saliva was extracted using DNA collection Oragene Kit (DNA Genotek, Ottawa, Canada) according to standard instructions
|
Label |
Cy3, Cy5
|
Label protocol |
Standard Infinium HumanMethylation450 BeadChip Illumina Protocol
|
|
|
Hybridization protocol |
EZ DNA Methylation-Gold Kit (Zymo Research) was used to DNA bisulphite convertion and the DNA sample was amplified, fragmented and hybridised to Infinium HumanMethylation450 BeadChip Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Data processing |
Data processing workflow described in the lumi R package have been used for color bias and background adjustments, qc plots and quantile normalization based on color balance adjusted data.
|
|
|
Submission date |
Mar 07, 2016 |
Last update date |
Mar 08, 2016 |
Contact name |
Andressa Bortoluzzi |
E-mail(s) |
andresbt10@gmail.com
|
Organization name |
Universidade Federal do Rio Grande do Sul -UFRGS
|
Department |
Psychiatric
|
Lab |
BRAIN
|
Street address |
Ramiro Barcelos, 2350
|
City |
Porto Alegre |
State/province |
RS |
ZIP/Postal code |
90035-903 |
Country |
Brazil |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE78975 |
Longitudinal DNA Methylome analysis from saliva sample of adolescents with anxiety disorders and controls to anxiety disorders |
|