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Sample GSM207637 Query DataSets for GSM207637
Status Public on Nov 01, 2007
Title L1236 untreated (2)
Sample type RNA
 
Source name Cell line
Organism Homo sapiens
Characteristics classical Hodgkin lymphoma
Biomaterial provider DSMZ
Treatment protocol untreated
Growth protocol RPMI 1640 supplemented with 10% fetal bovine serum at 37°C and 5% CO2
Extracted molecule total RNA
Extraction protocol Qiagen
Label Biotin
Label protocol Affymetrix standard protocol
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description no
Data processing GCOS TGT=2000
 
Submission date Jul 05, 2007
Last update date Aug 14, 2011
Contact name Anke Ehlers
E-mail(s) anke.ehlers@charite.de
Organization name Charité Universitätsmedizin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
State/province Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE8388 Epigenetic upregulation of B-cell inappropriate genes induces extinction of B-cell program in classical Hodgkin lymphoma

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL detection yes or no
DETECTION P-VALUE propability of obtaining a significant result

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 98.6053 P 0.0138105
AFFX-BioB-M_at 142.386 P 0.00110197
AFFX-BioB-3_at 50.2497 P 0.0309764
AFFX-BioC-5_at 190.665 P 0.000662269
AFFX-BioC-3_at 141.901 P 0.00159257
AFFX-BioDn-5_at 176.183 P 0.000195116
AFFX-BioDn-3_at 1145.61 P 0.000389797
AFFX-CreX-5_at 1818.38 P 4.42873e-05
AFFX-CreX-3_at 2493.25 P 4.42873e-05
AFFX-DapX-5_at 11.1598 A 0.175328
AFFX-DapX-M_at 31.7885 A 0.116113
AFFX-DapX-3_at 3.16675 A 0.749204
AFFX-LysX-5_at 8.48232 A 0.425962
AFFX-LysX-M_at 14.7186 A 0.51489
AFFX-LysX-3_at 3.76381 A 0.645547
AFFX-PheX-5_at 2.01271 A 0.760937
AFFX-PheX-M_at 2.71706 A 0.794268
AFFX-PheX-3_at 3.14809 A 0.932322
AFFX-ThrX-5_at 4.83033 A 0.672921
AFFX-ThrX-M_at 2.5412 A 0.834139

Total number of rows: 22283

Table truncated, full table size 666 Kbytes.




Supplementary file Size Download File type/resource
GSM207637.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM207637.CHP.gz 6.2 Mb (ftp)(http) CHP
GSM207637.EXP.gz 531 b (ftp)(http) EXP
Processed data included within Sample table
Processed data provided as supplementary file

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