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Sample GSM207636 Query DataSets for GSM207636
Status Public on Nov 01, 2007
Title L1236 untreated (1)
Sample type RNA
 
Source name Cell line
Organism Homo sapiens
Characteristics classical Hodgkin lymphoma
Biomaterial provider DSMZ
Treatment protocol untreated
Growth protocol RPMI 1640 supplemented with 10% fetal bovine serum at 37°C and 5% CO2
Extracted molecule total RNA
Extraction protocol Qiagen
Label Biotin
Label protocol Affymetrix standard protocol
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description no
Data processing GCOS TGT=2000
 
Submission date Jul 05, 2007
Last update date Aug 14, 2011
Contact name Anke Ehlers
E-mail(s) anke.ehlers@charite.de
Organization name Charité Universitätsmedizin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
State/province Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE8388 Epigenetic upregulation of B-cell inappropriate genes induces extinction of B-cell program in classical Hodgkin lymphoma

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL detection yes or no
DETECTION P-VALUE propability of obtaining a significant result

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 97.1376 P 0.0200219
AFFX-BioB-M_at 102.746 P 0.000972149
AFFX-BioB-3_at 37.9857 A 0.147939
AFFX-BioC-5_at 169.058 P 0.000662269
AFFX-BioC-3_at 107.387 P 0.000509415
AFFX-BioDn-5_at 167.833 P 0.000389797
AFFX-BioDn-3_at 1004.59 P 0.000509415
AFFX-CreX-5_at 1600.32 P 4.42873e-05
AFFX-CreX-3_at 2028.83 P 4.42873e-05
AFFX-DapX-5_at 8.83786 A 0.327079
AFFX-DapX-M_at 11.9324 A 0.287743
AFFX-DapX-3_at 2.61305 A 0.843268
AFFX-LysX-5_at 9.90898 A 0.300606
AFFX-LysX-M_at 6.87649 A 0.737173
AFFX-LysX-3_at 3.60165 A 0.5
AFFX-PheX-5_at 2.49595 A 0.749204
AFFX-PheX-M_at 2.11943 A 0.834139
AFFX-PheX-3_at 15.4608 A 0.51489
AFFX-ThrX-5_at 4.62092 A 0.794268
AFFX-ThrX-M_at 8.36438 A 0.617401

Total number of rows: 22283

Table truncated, full table size 667 Kbytes.




Supplementary file Size Download File type/resource
GSM207636.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM207636.CHP.gz 6.0 Mb (ftp)(http) CHP
GSM207636.EXP.gz 505 b (ftp)(http) EXP
Processed data included within Sample table
Processed data provided as supplementary file

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