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Sample GSM207588 Query DataSets for GSM207588
Status Public on Nov 01, 2007
Title L428 untreated (2)
Sample type RNA
 
Source name Cell line
Organism Homo sapiens
Characteristics classical Hodgkin lymphoma
Biomaterial provider DSMZ
Treatment protocol untreated
Growth protocol RPMI 1640 supplemented with 10% fetal bovine serum at 37°C and 5% CO2
Extracted molecule total RNA
Extraction protocol Qiagen
Label Biotin
Label protocol Affymetrix standard protocol
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description no
Data processing GCOS TGT=2000
 
Submission date Jul 05, 2007
Last update date Aug 14, 2011
Contact name Anke Ehlers
E-mail(s) anke.ehlers@charite.de
Organization name Charité Universitätsmedizin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
State/province Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE8388 Epigenetic upregulation of B-cell inappropriate genes induces extinction of B-cell program in classical Hodgkin lymphoma

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL detection yes or no
DETECTION P-VALUE propability of obtaining a significant result

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 107.738 P 0.0182806
AFFX-BioB-M_at 91.8402 P 0.000753643
AFFX-BioB-3_at 40.8776 P 0.036569
AFFX-BioC-5_at 162.998 P 0.000509415
AFFX-BioC-3_at 116.957 P 0.000126798
AFFX-BioDn-5_at 160.639 P 0.000169227
AFFX-BioDn-3_at 1007.6 P 0.000445901
AFFX-CreX-5_at 1685.07 P 4.42873e-05
AFFX-CreX-3_at 2271.03 P 4.42873e-05
AFFX-DapX-5_at 10.5727 A 0.262827
AFFX-DapX-M_at 11.4329 A 0.340661
AFFX-DapX-3_at 11.426 A 0.659339
AFFX-LysX-5_at 4.91455 A 0.58862
AFFX-LysX-M_at 9.11765 A 0.455413
AFFX-LysX-3_at 10.171 A 0.147939
AFFX-PheX-5_at 2.42495 A 0.783476
AFFX-PheX-M_at 0.608615 A 0.966323
AFFX-PheX-3_at 15.5742 A 0.48511
AFFX-ThrX-5_at 2.86613 A 0.876428
AFFX-ThrX-M_at 1.22314 A 0.724854

Total number of rows: 22283

Table truncated, full table size 667 Kbytes.




Supplementary file Size Download File type/resource
GSM207588.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM207588.CHP.gz 5.9 Mb (ftp)(http) CHP
GSM207588.EXP.gz 505 b (ftp)(http) EXP
Processed data included within Sample table
Processed data provided as supplementary file

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