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Sample GSM203359 Query DataSets for GSM203359
Status Public on Jun 22, 2007
Title R624P00744
Sample type RNA
Source name prostate cancer sample
Organism Homo sapiens
Characteristics Percentage of Tumor: 0%
Percentage of Stroma: 100%
Percentage of BPH: 0%
Percentage of Atrophic Gland: 0%
Extracted molecule total RNA
Extraction protocol QiaGen Rneasy extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix Scanner.
Description prostate
Data processing The data were analyzed and normalized with RMA.
Submission date Jun 21, 2007
Last update date Aug 14, 2011
Contact name Yipeng Wang
Phone 8585813960
Organization name Vaccine Research Institute of San Diego
Street address
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
Platform ID GPL96
Series (1)
GSE8218 Gene expression data from prostate cancer samples

Data table header descriptions
VALUE RMA calculated log2 Signal intensity

Data table
1007_s_at 9.703345409
1053_at 6.223871002
117_at 7.056175327
121_at 9.914823964
1255_g_at 5.016357585
1294_at 8.293706497
1316_at 6.23393216
1320_at 5.836355724
1405_i_at 5.609687117
1431_at 4.636258947
1438_at 8.417063697
1487_at 7.957514561
1494_f_at 7.870345873
1598_g_at 12.09417216
160020_at 9.444693011
1729_at 7.840218202
1773_at 6.61988934
177_at 6.4522319
179_at 9.974438023
1861_at 6.921211978

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM203359.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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