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Sample GSM194195 Query DataSets for GSM194195
Status Public on May 26, 2009
Title HighSES 6
Sample type RNA
Source name Peripheral blood CD2+ leukocytes
Organism Homo sapiens
Characteristics other: High socioeconomic status (SES)
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, CD2+ cells were isolated by MACS immunomagnetic positive selection, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
Submission date May 24, 2007
Last update date Mar 29, 2010
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
Platform ID GPL96
Series (1)
GSE7894 Differential gene expression in peripheral blood CD2+ leukocytes from PATH particpants

Data table header descriptions
VALUE Log2 metric RMA expression estimate.

Data table
205048_s_at 3.162621
202917_s_at 6.957504
221728_x_at 4.340745
220784_s_at 4.055243
209480_at 4.014546
214146_s_at 5.887938
214218_s_at 3.972781
209116_x_at 6.361221
200782_at 7.823664
201743_at 5.228211
211696_x_at 7.023719
202912_at 6.740661
214414_x_at 7.732722
202651_at 6.196853
217941_s_at 7.784162
206390_x_at 7.165246
202503_s_at 7.537004
202602_s_at 6.316813
215223_s_at 6.786612
217022_s_at 6.264467

Total number of rows: 22283

Table truncated, full table size 434 Kbytes.

Supplementary file Size Download File type/resource
GSM194195.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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