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Sample GSM194190 Query DataSets for GSM194190
Status Public on May 26, 2009
Title HighSES 1
Sample type RNA
Source name Peripheral blood CD2+ leukocytes
Organism Homo sapiens
Characteristics other: High socioeconomic status (SES)
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, CD2+ cells were isolated by MACS immunomagnetic positive selection, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
Submission date May 24, 2007
Last update date Mar 29, 2010
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
Platform ID GPL96
Series (1)
GSE7894 Differential gene expression in peripheral blood CD2+ leukocytes from PATH particpants

Data table header descriptions
VALUE Log2 metric RMA expression estimate.

Data table
205048_s_at 3.249134
202917_s_at 6.174639
221728_x_at 4.347257
220784_s_at 3.884127
209480_at 4.545936
214146_s_at 5.677095
214218_s_at 3.784688
209116_x_at 7.576633
200782_at 7.776856
201743_at 5.299941
211696_x_at 8.230533
202912_at 7.266430
214414_x_at 8.915254
202651_at 5.926067
217941_s_at 8.198069
206390_x_at 7.419116
202503_s_at 9.294340
202602_s_at 6.968276
215223_s_at 6.932093
217022_s_at 5.060551

Total number of rows: 22283

Table truncated, full table size 434 Kbytes.

Supplementary file Size Download File type/resource
GSM194190.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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