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Sample GSM1938957 Query DataSets for GSM1938957
Status Public on Mar 16, 2016
Title pES10 h-G1
Sample type genomic
Source name Haploid pES10 cells in G1 (1c)
Organism Homo sapiens
Characteristics cell line: h-pES10
passage: 15
differentiation status: Undifferentiated
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was isolated using the NucleoSpin Tissue Kit (MACHEREY-NAGEL)
Label Cy5 and Cy3
Label protocol Standard Illumina protocol
Hybridization protocol Standard Illumina protocol
Scan protocol BeadChips were scanned with Illumina's iScan System
Description 101070480024_R05C01
Data processing IDAT files were processed using Genome Studio Genotyping Module (Illumina)
GC Score, B Allele Frequency and Log R Ratio values obtained from Genome Studio Genotyping Module (Illumina)
Submission date Nov 12, 2015
Last update date Mar 16, 2016
Contact name Ido Sagi
Organization name The Hebrew University of Jerusalem
Department Genetics
Lab Nissim Benvenisty Lab, The Azrieli Center for Stem Cells and Genetic Research
Street address Givat Ram
City Jerusalem
ZIP/Postal code 91904
Country Israel
Platform ID GPL21135
Series (2)
GSE71458 Derivation and differentiation of haploid human embryonic stem cells
GSE74950 Derivation and differentiation of haploid human embryonic stem cells [SNP array]

Data table header descriptions
VALUE Log R Ratio

Data table
200610-1 -0.0833
200610-10 0.0685
200610-100 -0.0521
200610-102 0.1097
200610-105 0.1034
200610-107 -0.4105
200610-108 0.1046
200610-109 0.068
200610-110 0.0711
200610-111 0.0403
200610-112 0.2068
200610-113 0.1272
200610-114 0.0754
200610-115 0.1837
200610-116 -0.5692
200610-117 0.1966
200610-118 0.1362
200610-119 0.4168
200610-12 -0.0488
200610-120 -0.049

Total number of rows: 2583651

Table truncated, full table size 46530 Kbytes.

Supplementary file Size Download File type/resource
GSM1938957_101070480024_R05C01_Grn.idat.gz 17.4 Mb (ftp)(http) IDAT
GSM1938957_101070480024_R05C01_Red.idat.gz 17.7 Mb (ftp)(http) IDAT
Processed data included within Sample table
Processed data are available on Series record

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