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Sample GSM18481 Query DataSets for GSM18481
Status Public on Mar 24, 2004
Title PGA_PA-S_267
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 10, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 565.6 P 0.001102
AFFX-BioB-M_at 899.1 P 0.000857
AFFX-BioB-3_at 389.7 P 0.004484
AFFX-BioC-5_at 1355.1 P 0.00011
AFFX-BioC-3_at 1262.7 P 0.000052
AFFX-BioDn-5_at 1818.5 P 0.000052
AFFX-BioDn-3_at 10702.3 P 0.000195
AFFX-CreX-5_at 15689.3 P 0.000052
AFFX-CreX-3_at 17304.5 P 0.000044
AFFX-DapX-5_at 42 A 0.195246
AFFX-DapX-M_at 24.5 A 0.559354
AFFX-DapX-3_at 13.4 A 0.724854
AFFX-LysX-5_at 50.3 A 0.175328
AFFX-LysX-M_at 45.6 A 0.659352
AFFX-LysX-3_at 30.8 A 0.175328
AFFX-PheX-5_at 3.4 A 0.897835
AFFX-PheX-M_at 6.7 A 0.916408
AFFX-PheX-3_at 30.4 A 0.737173
AFFX-ThrX-5_at 19.3 A 0.51489
AFFX-ThrX-M_at 53.4 A 0.368438

Total number of rows: 54675

Table truncated, full table size 1451 Kbytes.




Supplementary file Size Download File type/resource
GSM18481_PA-S_267.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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