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Sample GSM18479 Query DataSets for GSM18479
Status Public on Mar 24, 2004
Title PGA_PA-S_233
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 10, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 484 P 0.001248
AFFX-BioB-M_at 703.9 P 0.000972
AFFX-BioB-3_at 300.4 P 0.010317
AFFX-BioC-5_at 1095.7 P 0.000169
AFFX-BioC-3_at 997.2 P 0.000044
AFFX-BioDn-5_at 1297.4 P 0.000052
AFFX-BioDn-3_at 8089.1 P 0.000297
AFFX-CreX-5_at 12180.6 P 0.000052
AFFX-CreX-3_at 14988.5 P 0.000044
AFFX-DapX-5_at 36 A 0.195266
AFFX-DapX-M_at 8.8 A 0.645547
AFFX-DapX-3_at 4.8 A 0.981719
AFFX-LysX-5_at 39.6 A 0.250796
AFFX-LysX-M_at 12 A 0.749204
AFFX-LysX-3_at 13.1 A 0.287743
AFFX-PheX-5_at 7.1 A 0.794268
AFFX-PheX-M_at 5.1 A 0.963431
AFFX-PheX-3_at 23.4 A 0.724854
AFFX-ThrX-5_at 68.8 A 0.368438
AFFX-ThrX-M_at 42.3 A 0.470241

Total number of rows: 54675

Table truncated, full table size 1450 Kbytes.




Supplementary file Size Download File type/resource
GSM18479_PA-S_233.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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