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Sample GSM18449 Query DataSets for GSM18449
Status Public on Mar 24, 2004
Title PGA_PA-N_300
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 675.9 P 0.000754
AFFX-BioB-M_at 931.9 P 0.000147
AFFX-BioB-3_at 547.7 P 0.004484
AFFX-BioC-5_at 1547.6 P 0.000195
AFFX-BioC-3_at 1524.2 P 0.000052
AFFX-BioDn-5_at 1728.3 P 0.000044
AFFX-BioDn-3_at 12099 P 0.000147
AFFX-CreX-5_at 18666.8 P 0.000044
AFFX-CreX-3_at 21011.9 P 0.000044
AFFX-DapX-5_at 7.6 A 0.574038
AFFX-DapX-M_at 14.6 A 0.52976
AFFX-DapX-3_at 4.6 A 0.973899
AFFX-LysX-5_at 42.9 A 0.116113
AFFX-LysX-M_at 48.3 A 0.617401
AFFX-LysX-3_at 24.6 A 0.227636
AFFX-PheX-5_at 10.6 A 0.699394
AFFX-PheX-M_at 4.6 A 0.978098
AFFX-PheX-3_at 23.1 A 0.804734
AFFX-ThrX-5_at 20.9 A 0.58862
AFFX-ThrX-M_at 10.8 A 0.712257

Total number of rows: 54675

Table truncated, full table size 1450 Kbytes.




Supplementary file Size Download File type/resource
GSM18449_PA-N_300.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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