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Sample GSM18448 Query DataSets for GSM18448
Status Public on Mar 24, 2004
Title PGA_PA-N_294
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 867.2 P 0.000754
AFFX-BioB-M_at 1330 P 0.000081
AFFX-BioB-3_at 600.7 P 0.000225
AFFX-BioC-5_at 2033.9 P 0.00011
AFFX-BioC-3_at 2002 P 0.000052
AFFX-BioDn-5_at 2470.4 P 0.000044
AFFX-BioDn-3_at 14233 P 0.000081
AFFX-CreX-5_at 25252.4 P 0.000052
AFFX-CreX-3_at 26762.2 P 0.000044
AFFX-DapX-5_at 47.7 A 0.083592
AFFX-DapX-M_at 54.2 A 0.227636
AFFX-DapX-3_at 12.1 A 0.921998
AFFX-LysX-5_at 47 A 0.147939
AFFX-LysX-M_at 34.6 A 0.51489
AFFX-LysX-3_at 12.3 A 0.425962
AFFX-PheX-5_at 8.5 A 0.58862
AFFX-PheX-M_at 5.9 A 0.960352
AFFX-PheX-3_at 29.6 A 0.699394
AFFX-ThrX-5_at 68.4 A 0.440646
AFFX-ThrX-M_at 42.7 A 0.631562

Total number of rows: 54675

Table truncated, full table size 1448 Kbytes.




Supplementary file Size Download File type/resource
GSM18448_PA-N_294.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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