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Sample GSM18442 Query DataSets for GSM18442
Status Public on Mar 24, 2004
Title PGA_PA-N_112
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 830.5 P 0.001248
AFFX-BioB-M_at 1030.8 P 0.000297
AFFX-BioB-3_at 412.6 P 0.00762
AFFX-BioC-5_at 1793 P 0.000127
AFFX-BioC-3_at 1612.1 P 0.000044
AFFX-BioDn-5_at 2236.3 P 0.000044
AFFX-BioDn-3_at 10151.1 P 0.000169
AFFX-CreX-5_at 19811.5 P 0.000052
AFFX-CreX-3_at 20674.4 P 0.000044
AFFX-DapX-5_at 24.7 A 0.425962
AFFX-DapX-M_at 39.5 A 0.300606
AFFX-DapX-3_at 8.9 A 0.966323
AFFX-LysX-5_at 24.9 A 0.083592
AFFX-LysX-M_at 43.4 A 0.544587
AFFX-LysX-3_at 23.5 A 0.102145
AFFX-PheX-5_at 7.9 A 0.783476
AFFX-PheX-M_at 6.4 A 0.976071
AFFX-PheX-3_at 35.7 A 0.686277
AFFX-ThrX-5_at 20.2 A 0.58862
AFFX-ThrX-M_at 11.6 A 0.712257

Total number of rows: 54675

Table truncated, full table size 1450 Kbytes.




Supplementary file Size Download File type/resource
GSM18442_PA-N_112-1.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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