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Sample GSM18430 Query DataSets for GSM18430
Status Public on Mar 24, 2004
Title PGA_PA-D_348
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 769.1 P 0.000754
AFFX-BioB-M_at 1349.6 P 0.000169
AFFX-BioB-3_at 770.5 P 0.00034
AFFX-BioC-5_at 2198 P 0.000081
AFFX-BioC-3_at 2122.9 P 0.000044
AFFX-BioDn-5_at 2616.5 P 0.000044
AFFX-BioDn-3_at 13777.3 P 0.000081
AFFX-CreX-5_at 24168.4 P 0.000052
AFFX-CreX-3_at 26803.5 P 0.000044
AFFX-DapX-5_at 47.2 A 0.165861
AFFX-DapX-M_at 34 A 0.39692
AFFX-DapX-3_at 8.2 A 0.932322
AFFX-LysX-5_at 19.3 A 0.470241
AFFX-LysX-M_at 54.1 A 0.470241
AFFX-LysX-3_at 6.5 A 0.699409
AFFX-PheX-5_at 4.1 A 0.843268
AFFX-PheX-M_at 41 A 0.686277
AFFX-PheX-3_at 38 A 0.686277
AFFX-ThrX-5_at 28.8 A 0.645547
AFFX-ThrX-M_at 22.6 A 0.544587

Total number of rows: 54675

Table truncated, full table size 1451 Kbytes.




Supplementary file Size Download File type/resource
GSM18430_PA-D_348.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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