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Sample GSM18428 Query DataSets for GSM18428
Status Public on Mar 24, 2004
Title PGA_PA-D_317
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1015.7 P 0.000972
AFFX-BioB-M_at 1365.1 P 0.000509
AFFX-BioB-3_at 856.2 P 0.001796
AFFX-BioC-5_at 2420.2 P 0.000147
AFFX-BioC-3_at 2122.8 P 0.000095
AFFX-BioDn-5_at 2882.9 P 0.000044
AFFX-BioDn-3_at 16216 P 0.000081
AFFX-CreX-5_at 27830.5 P 0.000044
AFFX-CreX-3_at 28997.6 P 0.000044
AFFX-DapX-5_at 19.1 A 0.617401
AFFX-DapX-M_at 54.9 A 0.41138
AFFX-DapX-3_at 18.2 A 0.963431
AFFX-LysX-5_at 69 A 0.195266
AFFX-LysX-M_at 125.8 A 0.5
AFFX-LysX-3_at 46 A 0.368438
AFFX-PheX-5_at 27.7 A 0.455413
AFFX-PheX-M_at 14.9 A 0.937071
AFFX-PheX-3_at 44.7 A 0.574038
AFFX-ThrX-5_at 21.8 A 0.824672
AFFX-ThrX-M_at 24 A 0.712257

Total number of rows: 54675

Table truncated, full table size 1452 Kbytes.




Supplementary file Size Download File type/resource
GSM18428_PA-D_317.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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