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Sample GSM18424 Query DataSets for GSM18424
Status Public on Mar 24, 2004
Title PGA_PA-D_206
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 794.9 P 0.001102
AFFX-BioB-M_at 904.6 P 0.002023
AFFX-BioB-3_at 423.2 P 0.015183
AFFX-BioC-5_at 1802.6 P 0.000147
AFFX-BioC-3_at 1678.8 P 0.000044
AFFX-BioDn-5_at 2607.8 P 0.000081
AFFX-BioDn-3_at 11415.6 P 0.000258
AFFX-CreX-5_at 23740.5 P 0.000052
AFFX-CreX-3_at 23560.6 P 0.000044
AFFX-DapX-5_at 49.9 A 0.227636
AFFX-DapX-M_at 57.3 A 0.425962
AFFX-DapX-3_at 8.1 A 0.860518
AFFX-LysX-5_at 27.1 A 0.287743
AFFX-LysX-M_at 18.1 A 0.737173
AFFX-LysX-3_at 37.5 A 0.275146
AFFX-PheX-5_at 11.1 A 0.760937
AFFX-PheX-M_at 8.4 A 0.883887
AFFX-PheX-3_at 38.4 A 0.804734
AFFX-ThrX-5_at 64.7 A 0.300606
AFFX-ThrX-M_at 30.2 A 0.631562

Total number of rows: 54675

Table truncated, full table size 1452 Kbytes.




Supplementary file Size Download File type/resource
GSM18424_PA-D_206.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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