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GEO accession:
Sample GSM180519
Query DataSets for GSM180519
Status
Public on Dec 09, 2008
Title
TregThy, rep2
Sample type
RNA
Source name
Treg cells isolated from the thymus
Organism
Mus musculus
Characteristics
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25+
Extracted molecule
total RNA
Extraction protocol
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label
Biotin
Label protocol
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol
Per Joslin Diabetes Center microarray core facility.
Scan protocol
Per Joslin Diabetes Center microarray core facility.
Description
jos3368.CEL
Data processing
RMA
Submission date
Apr 04, 2007
Last update date
Aug 28, 2018
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (2)
GSE7460
Contribution of Foxp3 to the Treg signature
GSE7852
Fat Treg cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
RMA-unlogged
Data table
ID_REF
VALUE
1415670_at
152.2276875
1415671_at
300.2586734
1415672_at
3259.988621
1415673_at
257.4867734
1415674_a_at
314.3071948
1415675_at
352.8600092
1415676_a_at
1757.559798
1415677_at
132.7783635
1415678_at
687.1731502
1415679_at
2811.302866
1415680_at
218.4155454
1415681_at
238.5542923
1415682_at
210.3742949
1415683_at
1094.621915
1415684_at
238.0597485
1415685_at
115.7342817
1415686_at
1076.221476
1415687_a_at
1296.046965
1415688_at
1815.913341
1415689_s_at
501.8837186
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180519.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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