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Sample GSM1728 Query DataSets for GSM1728
Status Public on Jun 27, 2002
Title Polio Polysomes
Sample type RNA
 
Channel 1
Source name Mock
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name Polio
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description Category: Infection
Subcategory: Polio virus
This experiment was an out file converted from rana. The original files were not provided to load this experiment in Oracle. Category and Subcategories were made by curators.Sample_lot_batch=nci125
Scanning Software: unknown
Software version: unknown
 
Submission date May 24, 2002
Last update date May 27, 2005
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL168
Series (1)
GSE62 mRNAs translated at eIF4F

Data table header descriptions
ID_REF
CH1B_MEDIAN median channel 1 background
CH1D_MEAN difference between CH1I_MEAN and CH1B_MEAN
CH2I_MEAN mean channel 2 signal
CH2D_MEAN difference of CH2I_MEAN and CH2B_MEAN
CH2B_MEDIAN median of channel 2 background
CH2BN_MEDIAN normalized CH2B_MEDIAN
CH2DN_MEAN normalized CH2D_MEAN
CH2IN_MEAN normalized CH2I_MEAN
FLAG user defined flag (default=0)
VALUE aka LOG_RAT2N_MEAN, or log10 of ratio of CH2DN_MEAN and CH1DN_MEAN
PERGTBCH1I_1SD standard deviation of fraction of pixels greater than CH1B_MEAN
PERGTBCH2I_1SD standard deviation of fraction of pixels greater than CH2B_MEAN
RAT1_MEAN ratio of CH1D_MEAN to CH2D_MEAN
RAT1N_MEAN ratio of CH1DN_MEAN to CH2DN_MEAN
RAT2_MEAN ratio of CH2D_MEAN to CH1D_MEAN
RAT2N_MEAN ratio of CH2DN_MEAN and CH1DN_MEAN
TOP vertical, short-axis spot ellipse minimum pixel coordinate
BOT vertical, short-axis spot ellipse maximum pixel coordinate
LEFT horizontal, long-axis spot ellipse minimum pixel coordinate
RIGHT horizontal, long-axis spot ellipse maximum pixel coordinate

Data table
ID_REF CH1B_MEDIAN CH1D_MEAN CH2I_MEAN CH2D_MEAN CH2B_MEDIAN CH2BN_MEDIAN CH2DN_MEAN CH2IN_MEAN FLAG VALUE PERGTBCH1I_1SD PERGTBCH2I_1SD RAT1_MEAN RAT1N_MEAN RAT2_MEAN RAT2N_MEAN TOP BOT LEFT RIGHT
1 717 63 321 49 272 272 49 321 0 -.363 0 0 1.286 1.286 .778 .778 15 24 43 52
2 722 101 327 62 265 265 62 327 0 -.704 0 0 1.629 1.629 .614 .614 15 24 51 60
3 725 87 345 77 268 268 77 345 0 -.176 0 0 1.13 1.13 .885 .885 15 24 60 69
4 726 97 345 65 280 280 65 345 0 -.578 0 0 1.492 1.492 .67 .67 15 24 68 77
5 750 89 348 68 280 280 68 348 0 -.388 0 0 1.309 1.309 .764 .764 15 24 77 86
6 742 80 340 58 282 282 58 340 0 -.464 0 0 1.379 1.379 .725 .725 15 24 85 94
7 728 318 690 410 280 280 410 690 0 .367 0 0 .776 .776 1.289 1.289 15 24 94 103
8 732 282 621 339 282 282 339 621 0 .266 0 0 .832 .832 1.202 1.202 15 24 102 111
9 718 81 350 66 284 284 66 350 0 -.295 0 0 1.227 1.227 .815 .815 15 24 111 120
10 746 448 1542 1253 289 289 1253 1542 0 1.484 0 0 .358 .358 2.797 2.797 15 24 119 128
11 716 73 321 54 267 267 54 321 0 -.435 0 0 1.352 1.352 .74 .74 15 24 128 137
12 715 88 348 76 272 272 76 348 0 -.212 0 0 1.158 1.158 .864 .864 15 24 136 145
13 721 231 828 552 276 276 552 828 0 1.257 0 0 .418 .418 2.39 2.39 15 24 145 154
14 722 111 367 83 284 284 83 367 0 -.419 0 0 1.337 1.337 .748 .748 15 24 153 162
15 717 124 360 90 270 270 90 360 0 -.462 0 0 1.378 1.378 .726 .726 15 24 162 171
16 721 312 681 405 276 276 405 681 0 .376 0 0 .77 .77 1.298 1.298 15 24 170 179
17 734 179 399 127 272 272 127 399 0 -.495 0 0 1.409 1.409 .709 .709 15 24 179 188
18 725 134 336 61 275 275 61 336 0 -1.135 0 0 2.197 2.197 .455 .455 15 24 187 196
19 726 374 768 486 282 282 486 768 0 .378 0 0 .77 .77 1.299 1.299 15 24 196 205
20 710 159 495 207 288 288 207 495 0 .381 0 0 .768 .768 1.302 1.302 15 24 204 213

Total number of rows: 10176

Table truncated, full table size 832 Kbytes.




Supplementary data files not provided
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